Gene Apre_0455 details

Gene Information

• Locus tag: Apre_0455
• ID: 8397230
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anaerococcus prevotii DSM 20548
• Kingdom: Bacteria
• Replicon accession: NC_013171
• Strand: +
• Start bp: 519343
• End bp: 519978
• Gene Length: 636 bp
• Protein Length: 211 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 644994812
• Product: putative transcriptional regulator, RpiR family
• Protein accession: YP_003152223
• Protein GI: 257065967
• COG category: [K] Transcription
• COG ID: [COG1737] Transcriptional regulators

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.000000000171967
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATTGCTA ATGAGATATT AAAAAACGGC CTTAATTACA ATCTTACAAT CAATGAATTT 
GCAAGTATCT GCTATACATC GAGGACCTCT GTCCTAAGAT TTGCCAAAAA GCTAGGATTT 
AATGGTTATA ATGACCTTAA ATACTACATA CTAAATGACA AAGTCGATAT TGTAACAAGC 
TCTGCTACAA GTTTCGATGC GAAAAAGGAG TTGATCTATA AGAAACTAGG AAAAGTAAAA 
AGAGCCTTTA TCTACGGCAA TGGGGCCTAT GAAGATATAA TTAAAGATTC GGTCAAAAGA 
CTGCTTTTTG ATGTAGGGAT CCTATCAGAA ACCTATGCAG GAGCTAAGGA GATAGTGGCC 
TTCGATAGAG AAATGCTTGA AGATTGCTTA GTAGTGATTG TGGATTTCTC CAAGGATGTA 
AGAAGCGAAG AATTAATGTT TCAGATTGCC TCAATCCCTT GCATAAAATT AATAGTAGGA 
AGCGAGTATA AGTCTATGAC AAAAAGTGAC TATAATATCT TTCTAGCTGA AGAAGAAAGA 
GAAGTTAGGC TAATAAGCCC CTATATAATA GAACTAGAGA AGTTTTTTAC AGAATTTCTA 
GAAAGGCAAA GTAATGATAT TGATGAACTT AGTTAG 

 

Protein sequence

MIANEILKNG LNYNLTINEF ASICYTSRTS VLRFAKKLGF NGYNDLKYYI LNDKVDIVTS 
SATSFDAKKE LIYKKLGKVK RAFIYGNGAY EDIIKDSVKR LLFDVGILSE TYAGAKEIVA 
FDREMLEDCL VVIVDFSKDV RSEELMFQIA SIPCIKLIVG SEYKSMTKSD YNIFLAEEER 
EVRLISPYII ELEKFFTEFL ERQSNDIDEL S