Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SaurJH1_0183 |
Symbol | |
ID | 5316631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus aureus subsp. aureus JH1 |
Kingdom | Bacteria |
Replicon accession | NC_009632 |
Strand | + |
Start bp | 214717 |
End bp | 215592 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640778253 |
Product | helix-turn-helix protein RpiR |
Protein accession | YP_001315332 |
Protein GI | 150392657 |
COG category | [K] Transcription |
COG ID | [COG1737] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAATA TTTTATATCG CATTGATAAA CAGTTGAGTG ATTTTACGAA GACAGAAAAG ATAATCGCTG ATTACATTTT AAAGAATCCA CATAAAATCA TTGATATGAC GGTGAATGAT TTGGCAGATG TTACGAATGT TAGTACAGCA TCAATTGTTA GATTTAGTCG GAAAATGACA CATCAAGGTT TTCAAGAGCT AAAGATTGCG ATATCTCGAT ACTTACCCGA AGATATTGCA ACCAATCCAC ATTTAGAATT GATTGAAAAT GAATCTGTAG AAACTTTGAA AAATAAAATG ATTGCTAGAG CAACGAATAC GATGCGATTT GTAGCTACTA ATATTATGGA TGCGCAAATT GATGCAATTT GTGATGTGTT GAAAAATGCC AGGACAATAT TTTTATTTGG ATTTGGCGCA TCGAGTTTGA CTATTGGTGA TCTTTTTCAA AAGTTATCTC GTATTGGCTT AAATGTCAGG TTATTACATG AAACGCATTT ACTTGTGTCA ACATTTGCGA CGCATGATGA TAGAGATTGC ATGATTTTTG TGACGAATCA AGGTAGTCAT AGTGAATTGC AGTCAATTGC ACAGGTGGCC ACACATTACA GTATTCCCAT CATAACTATA TCTAGTACAG CTAATAATCC AGTGGCTCAA ATTGCAGACT ATGCATTGAT TTATGGCAGA ACTGATGAAA ATGAAATGCG TATGGCGGCT ACAACTTCAC TATTTGCACA GTTATTCACG GTAGATATAT TGTACTATCG ATTTGTAGCA TTAAATTATC ATGCGATTCT AGATTGTATA ACCCAATCGA AAATGGCACT TGATAATTAC CGGAAGCATC TTGCGACGAT AGATTTTAAA CATTAG
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Protein sequence | MTNILYRIDK QLSDFTKTEK IIADYILKNP HKIIDMTVND LADVTNVSTA SIVRFSRKMT HQGFQELKIA ISRYLPEDIA TNPHLELIEN ESVETLKNKM IARATNTMRF VATNIMDAQI DAICDVLKNA RTIFLFGFGA SSLTIGDLFQ KLSRIGLNVR LLHETHLLVS TFATHDDRDC MIFVTNQGSH SELQSIAQVA THYSIPIITI SSTANNPVAQ IADYALIYGR TDENEMRMAA TTSLFAQLFT VDILYYRFVA LNYHAILDCI TQSKMALDNY RKHLATIDFK H
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