Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_0338 |
Symbol | |
ID | 6478208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 403178 |
End bp | 404026 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642729483 |
Product | transcriptional regulator, RpiR family |
Protein accession | YP_002026726 |
Protein GI | 194364116 |
COG category | [K] Transcription |
COG ID | [COG1737] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGCCCC TGCTGAAGAT CCGTTCCGAG CGCGGGCAGA TGTCGGCCAT CGAGCGCCGC ATCGCCGACT TCATCCTCGA CAACGCCCAC CTGCTGCGCG ACTACTCGTC CCAGCAGCTG GCCAGCGCGT TGGGCATCAG CCAGTCCAGC GTGGTGAAGT TCAGCCAGAA GCTCGGCTTC AAGGGCTACC CGGACCTGAA ATACTCCATC GGTCAGGACG TGGCCCGCGC GGGTGCCGAC CCGCAACAGG CGCCCAGCGA ACCAGACAGC GGTGACGACT ACCTGCGCCT GGGCGAGGCC CTGCGCCGCA GCAAGGCACA GGCCGAGGAG GAAACCCGCC AGGCCAATCC GCGCGAGGAG ATCGAGCGCA TCGTGCAGCT GCTCGATGGG GCACCGAAGC TGTTCGTGTA CGGACTGGGT GATGACGGCC TGTACGCGCG TGAGTTCGCC ATGCGGCTGT CGCTGCTCGG GCTGCTGGTG GTGCCGCATA CCGACCCGAT CCTGATGCTG GCCAACCTGT CAGCGGCACG CCCGGGTGAC GTGCTGTTGA TGTTCTCCGA GTTCGGCAAC CTGCCCCAGC TGTCGCAGCT GTCGCGGCAG TTCCAGGATA TGGGCGGCAA GGTGATTTCC ATTACCCGCC ACACCGCCAA CCCGCTGCGC GCGCATGCTG ATGCCGCGCT GGCGGTGTGC GCGCACGACC GCACGCCGCA GGTCGCGCAG CTGCTGTACC GTAGCGCCAT GCACGCGCTG CTCGATTTCC TGTTCGTGCT GCTCTGCCAC GCCAATCCGG ACCGCCAGCA GCAACTGGCG GTGAACCTGG AGCGGATCGA CCACCTGCTG GATTCCTGA
|
Protein sequence | MPPLLKIRSE RGQMSAIERR IADFILDNAH LLRDYSSQQL ASALGISQSS VVKFSQKLGF KGYPDLKYSI GQDVARAGAD PQQAPSEPDS GDDYLRLGEA LRRSKAQAEE ETRQANPREE IERIVQLLDG APKLFVYGLG DDGLYAREFA MRLSLLGLLV VPHTDPILML ANLSAARPGD VLLMFSEFGN LPQLSQLSRQ FQDMGGKVIS ITRHTANPLR AHADAALAVC AHDRTPQVAQ LLYRSAMHAL LDFLFVLLCH ANPDRQQQLA VNLERIDHLL DS
|
| |