Gene Smal_0338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0338 
Symbol 
ID6478208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp403178 
End bp404026 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content67% 
IMG OID642729483 
Producttranscriptional regulator, RpiR family 
Protein accessionYP_002026726 
Protein GI194364116 
COG category[K] Transcription 
COG ID[COG1737] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCCCC TGCTGAAGAT CCGTTCCGAG CGCGGGCAGA TGTCGGCCAT CGAGCGCCGC 
ATCGCCGACT TCATCCTCGA CAACGCCCAC CTGCTGCGCG ACTACTCGTC CCAGCAGCTG
GCCAGCGCGT TGGGCATCAG CCAGTCCAGC GTGGTGAAGT TCAGCCAGAA GCTCGGCTTC
AAGGGCTACC CGGACCTGAA ATACTCCATC GGTCAGGACG TGGCCCGCGC GGGTGCCGAC
CCGCAACAGG CGCCCAGCGA ACCAGACAGC GGTGACGACT ACCTGCGCCT GGGCGAGGCC
CTGCGCCGCA GCAAGGCACA GGCCGAGGAG GAAACCCGCC AGGCCAATCC GCGCGAGGAG
ATCGAGCGCA TCGTGCAGCT GCTCGATGGG GCACCGAAGC TGTTCGTGTA CGGACTGGGT
GATGACGGCC TGTACGCGCG TGAGTTCGCC ATGCGGCTGT CGCTGCTCGG GCTGCTGGTG
GTGCCGCATA CCGACCCGAT CCTGATGCTG GCCAACCTGT CAGCGGCACG CCCGGGTGAC
GTGCTGTTGA TGTTCTCCGA GTTCGGCAAC CTGCCCCAGC TGTCGCAGCT GTCGCGGCAG
TTCCAGGATA TGGGCGGCAA GGTGATTTCC ATTACCCGCC ACACCGCCAA CCCGCTGCGC
GCGCATGCTG ATGCCGCGCT GGCGGTGTGC GCGCACGACC GCACGCCGCA GGTCGCGCAG
CTGCTGTACC GTAGCGCCAT GCACGCGCTG CTCGATTTCC TGTTCGTGCT GCTCTGCCAC
GCCAATCCGG ACCGCCAGCA GCAACTGGCG GTGAACCTGG AGCGGATCGA CCACCTGCTG
GATTCCTGA
 
Protein sequence
MPPLLKIRSE RGQMSAIERR IADFILDNAH LLRDYSSQQL ASALGISQSS VVKFSQKLGF 
KGYPDLKYSI GQDVARAGAD PQQAPSEPDS GDDYLRLGEA LRRSKAQAEE ETRQANPREE
IERIVQLLDG APKLFVYGLG DDGLYAREFA MRLSLLGLLV VPHTDPILML ANLSAARPGD
VLLMFSEFGN LPQLSQLSRQ FQDMGGKVIS ITRHTANPLR AHADAALAVC AHDRTPQVAQ
LLYRSAMHAL LDFLFVLLCH ANPDRQQQLA VNLERIDHLL DS