| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0894 |
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| Symbol | rpiR |
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| ID | 6362877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | - |
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| Start bp | 1026784 |
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| End bp | 1027653 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642680062 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001954838 |
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| Protein GI | 189439757 |
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| COG category | [K] Transcription |
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| COG ID | [COG1737] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAATCCT CGGTGGGAAT ACGTGAGCGC ATCGACCACG TGTATCCGTC GCTGCGTCCG
GCGGAGCGCG CCGTGGCCCA GTATATTCGG GATCATATCG AGGAGGCGGC CGACCTGACC
GTCGGCCAGA TGGCCGACAT CGCCCACGTC AGCCAGCCGA CGGTGATTCG TTTCGCCCGC
AAGCTCGGTT TCGGCGGTTA CCGTGAACTG CGGTACGTGT TGCGCCATCC GGCCGCCGAG
CACAAAGTGA CCTTCAATCC GTTGGCTGGA TTCGATCTGA ATCCGTGGGA TGGCGAAGAT
GAGATTCCCG GCAAAGCGGC CTATGGCGCG AAGGCGCTGA TCGATGAGCT GCACAGTGCG
TTGGACCCCA AGGCCTATCG CAAGGCGGTC GCCCTACTCG CCGAATCGGA GTTCATCGAT
ATTTTCGGCG TGGAGAACTC GTTGACACCG GCGATGGATC TGTTCACCAA GCTCGGCTAC
CTGGGACTGA CATGCCGTCT CAATACCGAC GCTTACCTGC AGCAGATCGG TGCCGGGCAC
CTGCCCCACG GCGCTGTGGC CGTCGCCTTC TCCCATTCGG GTAGTTCGGC GGATACGGTC
AAAGCGTTGC GATTGGCGAA ATCGCATGGC GCGAAAACCA TCGCCATAAC CAATGCCATC
GGCGCGCCGC TGGCCAGCTG GGCCGACGTG ACGTTGCTGA CGGGTCGTGA CTCGCACACG
ATCTATGGCA ATGCGATTTT CTCGCGCGTG GCCGATACCG CGCTCGTGGA CATGCTGTAC
ATGGGCGTGA TTCTGTCCGA CTACGGCCGT TTCTCCACCG CGCTCGACGA ATCCGGTCGC
ATGATTCGCG ACCGCGTATT CGAGAACTGA
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| Protein sequence | MQSSVGIRER IDHVYPSLRP AERAVAQYIR DHIEEAADLT VGQMADIAHV SQPTVIRFAR
KLGFGGYREL RYVLRHPAAE HKVTFNPLAG FDLNPWDGED EIPGKAAYGA KALIDELHSA
LDPKAYRKAV ALLAESEFID IFGVENSLTP AMDLFTKLGY LGLTCRLNTD AYLQQIGAGH
LPHGAVAVAF SHSGSSADTV KALRLAKSHG AKTIAITNAI GAPLASWADV TLLTGRDSHT
IYGNAIFSRV ADTALVDMLY MGVILSDYGR FSTALDESGR MIRDRVFEN
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