Gene Sterm_3662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_3662 
Symbol 
ID8599108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp3890845 
End bp3891600 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content29% 
IMG OID 
Producttranscriptional regulator, RpiR family 
Protein accessionYP_003310427 
Protein GI269122250 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.078396 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAG ATGTTTTAAT TAACAAATAT TATGAAAAAT TAAATAGTAA TGATTTATAT 
ATATTGAACT ATATAAAAAA TAATCCTGAG ACCTCTGATG TTAATATAAC TTTGCTTTCT
AAAATGTGTA ATTCCTCCAC AGCCTCTATT CTCCGAATGA CCAAAAAACT GGGTTTTTCA
GGATACAGCG AATTTAAATA TTTTTTAAAA AGTCTGACAG CCTCTAAAGA AAGTCAGGAT
TTGAAAACAA GACTGGAAGT TCTGGCCTCT GATGTAGAGC ATACTATGAA AATATTTAAA
AATAATAACC AGCTCAGTGA AACATGTGAT TTGTTATATA ATGCAAAAAA TATCTATGCT
TATGGAACCG GATATGGTCA AAAGCTGATG CTTCAGGAAT TTTCCCGTTG TATGCTGAAT
TGCGGAAAAA ATATCATAAT AATTCCTGCA TTTACTGAAT TCAGAATTGC AGTTCAGAAT
ATGAAAGAAA GTGATATGGT AATAATAGCC TCATTATCTG GTAATGCCCG CGATATTGCC
GAACTGATAC ACATATTAAA TCTAAAAAAC ATACCTATTT TATCAATAAC TAATTTTAAC
GATAATACAC TTTCTAAATT AACTCCGTAT AATCTTTATT ATCAGTCTTC AAATATAAAT
ACCGAGGACA GTCTGAATAA TTCTTCTTAT GTTACCCTAA ATTTATTGCT TAATTTTATT
TATGAAGGAT ATATGGATTT TATCGAATCA AAATAA
 
Protein sequence
MKLDVLINKY YEKLNSNDLY ILNYIKNNPE TSDVNITLLS KMCNSSTASI LRMTKKLGFS 
GYSEFKYFLK SLTASKESQD LKTRLEVLAS DVEHTMKIFK NNNQLSETCD LLYNAKNIYA
YGTGYGQKLM LQEFSRCMLN CGKNIIIIPA FTEFRIAVQN MKESDMVIIA SLSGNARDIA
ELIHILNLKN IPILSITNFN DNTLSKLTPY NLYYQSSNIN TEDSLNNSSY VTLNLLLNFI
YEGYMDFIES K