Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_3662 |
Symbol | |
ID | 8599108 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | + |
Start bp | 3890845 |
End bp | 3891600 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | |
Product | transcriptional regulator, RpiR family |
Protein accession | YP_003310427 |
Protein GI | 269122250 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.078396 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTAG ATGTTTTAAT TAACAAATAT TATGAAAAAT TAAATAGTAA TGATTTATAT ATATTGAACT ATATAAAAAA TAATCCTGAG ACCTCTGATG TTAATATAAC TTTGCTTTCT AAAATGTGTA ATTCCTCCAC AGCCTCTATT CTCCGAATGA CCAAAAAACT GGGTTTTTCA GGATACAGCG AATTTAAATA TTTTTTAAAA AGTCTGACAG CCTCTAAAGA AAGTCAGGAT TTGAAAACAA GACTGGAAGT TCTGGCCTCT GATGTAGAGC ATACTATGAA AATATTTAAA AATAATAACC AGCTCAGTGA AACATGTGAT TTGTTATATA ATGCAAAAAA TATCTATGCT TATGGAACCG GATATGGTCA AAAGCTGATG CTTCAGGAAT TTTCCCGTTG TATGCTGAAT TGCGGAAAAA ATATCATAAT AATTCCTGCA TTTACTGAAT TCAGAATTGC AGTTCAGAAT ATGAAAGAAA GTGATATGGT AATAATAGCC TCATTATCTG GTAATGCCCG CGATATTGCC GAACTGATAC ACATATTAAA TCTAAAAAAC ATACCTATTT TATCAATAAC TAATTTTAAC GATAATACAC TTTCTAAATT AACTCCGTAT AATCTTTATT ATCAGTCTTC AAATATAAAT ACCGAGGACA GTCTGAATAA TTCTTCTTAT GTTACCCTAA ATTTATTGCT TAATTTTATT TATGAAGGAT ATATGGATTT TATCGAATCA AAATAA
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Protein sequence | MKLDVLINKY YEKLNSNDLY ILNYIKNNPE TSDVNITLLS KMCNSSTASI LRMTKKLGFS GYSEFKYFLK SLTASKESQD LKTRLEVLAS DVEHTMKIFK NNNQLSETCD LLYNAKNIYA YGTGYGQKLM LQEFSRCMLN CGKNIIIIPA FTEFRIAVQN MKESDMVIIA SLSGNARDIA ELIHILNLKN IPILSITNFN DNTLSKLTPY NLYYQSSNIN TEDSLNNSSY VTLNLLLNFI YEGYMDFIES K
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