21 homologs were found in PanDaTox collection
for query gene Veis_3102 on replicon NC_008786
Organism: Verminephrobacter eiseniae EF01-2



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008786  Veis_3102  XRE family transcriptional regulator  100 
 
 		 87 aa  172  9.999999999999999e-43  Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  0.0346423 
 
 
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NC_009439  Pmen_4031  XRE family transcriptional regulator  79.76 
 
 		 88 aa  134  5e-31  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  0.858841 
 
 
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NC_007951  Bxe_A1931  XRE family transcriptional regulator  70.59 
 
 		 88 aa  123  7e-28  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  1 
 
 
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NC_010676  Bphyt_5431  transcriptional regulator, XRE family  36.25 
 
 		 110 aa  50.4  0.000008  Burkholderia phytofirmans PsJN  Bacteria  normal  0.716387  normal  0.867638 
 
 
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NC_010815  Glov_3687  transcriptional regulator, XRE family  32.1 
 
 		 79 aa  46.6  0.0001  Geobacter lovleyi SZ  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008607  Ppro_3808  XRE family transcriptional regulator  32.05 
 
 		 80 aa  45.4  0.0003  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.0020912  n/a   
 
 
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NC_012669  Bcav_3260  transcriptional regulator, XRE family  35.14 
 
 		 513 aa  43.5  0.0009  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0795644  normal  0.23679 
 
 
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NC_007974  Rmet_4900  hypothetical protein  40.48 
 
 		 105 aa  43.5  0.0009  Cupriavidus metallidurans CH34  Bacteria  normal  0.978216  normal  0.040659 
 
 
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NC_013124  Afer_0033  transcriptional regulator, XRE family  40.32 
 
 		 169 aa  43.1  0.001  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.400371  n/a   
 
 
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NC_008786  Veis_0718  XRE family transcriptional regulator  36.92 
 
 		 171 aa  43.5  0.001  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.764173  normal  1 
 
 
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NC_009901  Spea_0943  XRE family transcriptional regulator  42.31 
 
 		 182 aa  43.1  0.001  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
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NC_013530  Xcel_1144  transcriptional regulator, XRE family  42.62 
 
 		 266 aa  42.4  0.002  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_007514  Cag_1274  XRE family transcriptional regulator  30.86 
 
 		 86 aa  42.7  0.002  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.329441  n/a   
 
 
-
 
NC_007492  Pfl01_0204  XRE family transcriptional regulator  31.75 
 
 		 82 aa  42  0.003  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003296  RSp1252  putative transcription regulator protein  40.91 
 
 		 88 aa  42  0.003  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007643  Rru_A0895  putative transcriptional regulator  36.84 
 
 		 110 aa  41.6  0.004  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.652502  n/a   
 
 
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NC_014214  Mesil_3662  protein of unknown function UPF0150  37.5 
 
 		 146 aa  41.2  0.004  Meiothermus silvanus DSM 9946  Bacteria  normal  1  n/a   
 
 
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NC_010483  TRQ2_0273  XRE family transcriptional regulator  41.38 
 
 		 176 aa  40.4  0.007  Thermotoga sp. RQ2  Bacteria  decreased coverage  0.0000144131  n/a   
 
 
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NC_009486  Tpet_0275  cupin 2 domain-containing protein  41.38 
 
 		 188 aa  40.4  0.007  Thermotoga petrophila RKU-1  Bacteria  decreased coverage  0.00000000353927  n/a   
 
 
-
 
NC_007512  Plut_1915  XRE family transcriptional regulator  36.51 
 
 		 80 aa  40.4  0.007  Chlorobium luteolum DSM 273  Bacteria  normal  0.799088  normal  1 
 
 
-
 
NC_011060  Ppha_0791  transcriptional regulator, XRE family  38.33 
 
 		 91 aa  40  0.01  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  1  n/a   
 
 
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