Gene Afer_0033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0033 
Symbol 
ID8322080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand+ 
Start bp34708 
End bp35217 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content70% 
IMG OID644951181 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003108681 
Protein GI256370857 
COG category[R] General function prediction only 
COG ID[COG1669] Predicted nucleotidyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.400371 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAGCG TCGGCGAGGT GCTGAGGGAG GCCCGACGTC GTGCCGGGCT GACGCAGGCG 
GAACTAGGTC GACGCGCCGG GGTGACGCAG AGCGTCGTCA GTGCGTACGA GTCCGGTGCG 
CGCCAGCCAT CGGTGTCGAT GCTGGCTCGT CTGGTCGCCG CCGCGGGCGC CGAGCTGCGG 
ATGGAGCTGT CCGAACCTGC GGGGGCCGCA GCGCCAGGCG GTGAACTCGG CCAGCGGCTG 
CGAGACCGCC GCGCCGAGCT CCAGAGGATC CTGGCCCGCT ACGGACTGCG CAACGCCCGC 
TTGTTCGGGA GCGTCGCCCG CGGCGATGCG GGTCCAGACA GCGACATCGA TCTTCTCGTC 
GACGTGCCTG GCGGAGTGGG CCTCGTGACT CTTGGACGCT GCCAGGCTGA GGTCGAACAG 
CTCCTCGGAG TCCACGTGGA CCTGGTACCG GCGAGCGATC TCAAGGCTGG CGTCGCTGCC 
GAGGTTCTCA GCGAGGCAGT GCCACTGTGA
 
Protein sequence
MDSVGEVLRE ARRRAGLTQA ELGRRAGVTQ SVVSAYESGA RQPSVSMLAR LVAAAGAELR 
MELSEPAGAA APGGELGQRL RDRRAELQRI LARYGLRNAR LFGSVARGDA GPDSDIDLLV 
DVPGGVGLVT LGRCQAEVEQ LLGVHVDLVP ASDLKAGVAA EVLSEAVPL