Gene Spea_0943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0943 
Symbol 
ID5661342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp1151198 
End bp1151746 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content45% 
IMG OID641235488 
ProductXRE family transcriptional regulator 
Protein accessionYP_001500805 
Protein GI157960771 
COG category[K] Transcription 
COG ID[COG3620] Predicted transcriptional regulator with C-terminal CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGATATCG GAGAAAACCT TAAACGGGTG AGAAAAGAAA AGGGCTTATC CCAACGAGAG 
TTGGCTAAGC GTGCAGGAGT GACCAACAGC ACTATCTCAA TGATTGAGAA AAATAGTGTG
AGCCCTTCGG TCAGTTCACT TAAAAAAGTA CTTTCAGGTT TGCCTATGTC TTTAGTGGAT
TTCTTTTCTA TCGAAGACTC CACATTGGTA GAGCAGAAGG TGGTATATCG TAGCGATGAG
CTATTAGATA TCGGCGACGG CATGCTGGAC TTTAAGTTGA TTGGTCGAGA CTTTCCCAAT
CGCGCTATGT CTGTGATGAG CGAAACCTAC CCACCTGGGT CGGATACTGG CATTGAGATG
CTTAAGCATG AAGGTCAAGA AGCTGCCATG GTCATTGAGG GACGTCTTGA GCTGACTGTT
GGTGAGGAAG TCTTTGAGTT AGAAGAAGGC GATAGTTATT ACTTTAATAG TGAGTTACCC
CATCGTTTTC GTAATCCGTT TGATGAGCCT TGCCGCATCA TTAGCGCCAC AACACCTGCT
AATTTTTAG
 
Protein sequence
MDIGENLKRV RKEKGLSQRE LAKRAGVTNS TISMIEKNSV SPSVSSLKKV LSGLPMSLVD 
FFSIEDSTLV EQKVVYRSDE LLDIGDGMLD FKLIGRDFPN RAMSVMSETY PPGSDTGIEM
LKHEGQEAAM VIEGRLELTV GEEVFELEEG DSYYFNSELP HRFRNPFDEP CRIISATTPA
NF