Gene Tpet_0275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0275 
Symbol 
ID5171595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp260190 
End bp260756 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content45% 
IMG OID640562778 
Productcupin 2 domain-containing protein 
Protein accessionYP_001243880 
Protein GI148269420 
COG category[K] Transcription
[S] Function unknown 
COG ID[COG1476] Predicted transcriptional regulators
[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000353927 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCAACTA TAGTGGACAA AGGAGTTGGG AACTTTGTGA GGATCGGAGA AAAACTCAGG 
AAATTAAGGC TCTCAAAAGG GCTCACACAA GAAGAACTCG CAGAACGCAC AGATCTTTCA
AGAAGTTTCA TTTCACAGCT CGAATCAGAC AAGACGTCTC CATCTATAGA TACCCTTGAA
AGGATTCTGG AAGCGCTGGG TACAGATTTG AAGCACTTTT TCTCCGACGT GGAAGAAGAG
AGGGTTGTGT TCAAAAAAGA AGAGAGGGTT CCGGTCTACG ACGAGCCAGA GGGTGTGAAG
AGTGAGATTC TGATGAGCGG TGTGGAAGAC AAAGAGATCG ATCCGATTCT CGTAACACTG
GAACCCGGTG CACAGACGGA GGAAGAATCG TACCATGAAG GTTCGGAGTT CGGCTTTGTG
ATCCAGGGAA GGATAGATCT TTACCTCGAT GACAAACGTT ACAGGTTGAA AGAGGGAGAC
TGTTTCTACT ACAAAGCAGA CAAAAAGCAT TACGTAAAGA ATTCGGGAAA GAAGAAGGCG
GTGTTACTCT GGATCATGAT TGACTAA
 
Protein sequence
MSTIVDKGVG NFVRIGEKLR KLRLSKGLTQ EELAERTDLS RSFISQLESD KTSPSIDTLE 
RILEALGTDL KHFFSDVEEE RVVFKKEERV PVYDEPEGVK SEILMSGVED KEIDPILVTL
EPGAQTEEES YHEGSEFGFV IQGRIDLYLD DKRYRLKEGD CFYYKADKKH YVKNSGKKKA
VLLWIMID