Gene Tpet_0275 details

Gene Information

• Locus tag: Tpet_0275
• ID: 5171595
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga petrophila RKU-1
• Kingdom: Bacteria
• Replicon accession: NC_009486
• Strand: +
• Start bp: 260190
• End bp: 260756
• Gene Length: 567 bp
• Protein Length: 188 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640562778
• Product: cupin 2 domain-containing protein
• Protein accession: YP_001243880
• Protein GI: 148269420
• COG category: [K] Transcription; [S] Function unknown
• COG ID: [COG1476] Predicted transcriptional regulators; [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.00000000353927
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGTCAACTA TAGTGGACAA AGGAGTTGGG AACTTTGTGA GGATCGGAGA AAAACTCAGG 
AAATTAAGGC TCTCAAAAGG GCTCACACAA GAAGAACTCG CAGAACGCAC AGATCTTTCA 
AGAAGTTTCA TTTCACAGCT CGAATCAGAC AAGACGTCTC CATCTATAGA TACCCTTGAA 
AGGATTCTGG AAGCGCTGGG TACAGATTTG AAGCACTTTT TCTCCGACGT GGAAGAAGAG 
AGGGTTGTGT TCAAAAAAGA AGAGAGGGTT CCGGTCTACG ACGAGCCAGA GGGTGTGAAG 
AGTGAGATTC TGATGAGCGG TGTGGAAGAC AAAGAGATCG ATCCGATTCT CGTAACACTG 
GAACCCGGTG CACAGACGGA GGAAGAATCG TACCATGAAG GTTCGGAGTT CGGCTTTGTG 
ATCCAGGGAA GGATAGATCT TTACCTCGAT GACAAACGTT ACAGGTTGAA AGAGGGAGAC 
TGTTTCTACT ACAAAGCAGA CAAAAAGCAT TACGTAAAGA ATTCGGGAAA GAAGAAGGCG 
GTGTTACTCT GGATCATGAT TGACTAA 

 

Protein sequence

MSTIVDKGVG NFVRIGEKLR KLRLSKGLTQ EELAERTDLS RSFISQLESD KTSPSIDTLE 
RILEALGTDL KHFFSDVEEE RVVFKKEERV PVYDEPEGVK SEILMSGVED KEIDPILVTL 
EPGAQTEEES YHEGSEFGFV IQGRIDLYLD DKRYRLKEGD CFYYKADKKH YVKNSGKKKA 
VLLWIMID