26 homologs were found in PanDaTox collection
for query gene Sbal_4427 on replicon NC_009036
Organism: Shewanella baltica OS155



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009036  Sbal_4427  single-strand DNA-binding protein  100 
 
 
149 aa  306  8e-83  Shewanella baltica OS155  Bacteria  normal  0.36853  normal  0.0713617 
 
 
-
 
NC_010501  PputW619_3292  single-stranded DNA-binding protein  39.06 
 
 
142 aa  86.7  1e-16  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2920  single-stranded DNA-binding protein  41.67 
 
 
142 aa  86.3  1e-16  Pseudomonas putida F1  Bacteria  normal  0.0972724  normal 
 
 
-
 
NC_007005  Psyr_1522  single-stranded DNA-binding protein  33.58 
 
 
154 aa  84  6e-16  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.0429088 
 
 
-
 
NC_013421  Pecwa_1659  single-stranded DNA-binding protein  40 
 
 
133 aa  83.2  0.000000000000001  Pectobacterium wasabiae WPP163  Bacteria  normal  0.403292  n/a   
 
 
-
 
NC_008752  Aave_0559  single-stranded DNA-binding protein  38.52 
 
 
128 aa  80.9  0.000000000000005  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_4149  single-stranded DNA-binding protein  40.74 
 
 
146 aa  81.3  0.000000000000005  Delftia acidovorans SPH-1  Bacteria  normal  0.0290175  hitchhiker  0.00842229 
 
 
-
 
NC_007951  Bxe_A1224  single-stranded DNA-binding protein  37.32 
 
 
146 aa  80.9  0.000000000000006  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.235304 
 
 
-
 
NC_008782  Ajs_1312  single-stranded DNA-binding protein  39.57 
 
 
150 aa  80.9  0.000000000000006  Acidovorax sp. JS42  Bacteria  normal  normal  0.314977 
 
 
-
 
NC_008782  Ajs_1446  single-stranded DNA-binding protein  39.57 
 
 
150 aa  80.9  0.000000000000006  Acidovorax sp. JS42  Bacteria  decreased coverage  0.00973819  normal 
 
 
-
 
NC_009719  Plav_3384  single-stranded DNA-binding protein  37.88 
 
 
146 aa  79  0.00000000000002  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.822794  normal  0.066334 
 
 
-
 
NC_007973  Rmet_2297  single-stranded DNA-binding protein  37.88 
 
 
146 aa  79  0.00000000000002  Cupriavidus metallidurans CH34  Bacteria  hitchhiker  0.000000851295  hitchhiker  0.000107938 
 
 
-
 
NC_007492  Pfl01_3000  single-stranded DNA-binding protein  36.43 
 
 
146 aa  78.6  0.00000000000003  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.0539656  normal 
 
 
-
 
NC_012912  Dd1591_0473  single-stranded DNA-binding protein  37.4 
 
 
133 aa  78.2  0.00000000000004  Dickeya zeae Ech1591  Bacteria  normal  0.223313  n/a   
 
 
-
 
NC_012856  Rpic12D_0643  single-stranded DNA-binding protein  37.88 
 
 
149 aa  77.8  0.00000000000005  Ralstonia pickettii 12D  Bacteria  normal  0.462725  normal  0.0721764 
 
 
-
 
NC_011901  Tgr7_2820  single-stranded DNA-binding protein  39.53 
 
 
132 aa  76.6  0.0000000000001  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.129154  n/a   
 
 
-
 
NC_009656  PSPA7_4462  single-stranded DNA-binding protein  36.89 
 
 
162 aa  73.2  0.000000000001  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A2341  single-stranded DNA-binding protein  38.84 
 
 
127 aa  73.2  0.000000000001  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_0991  single-stranded DNA-binding protein  38.84 
 
 
127 aa  73.2  0.000000000001  Thauera sp. MZ1T  Bacteria  normal  0.187271  n/a   
 
 
-
 
NC_008463  PA14_59150  single-stranded DNA-binding protein  36.89 
 
 
156 aa  73.2  0.000000000001  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.00000296817  hitchhiker  0.00187587 
 
 
-
 
NC_008782  Ajs_2234  single-stranded DNA-binding protein  38.02 
 
 
127 aa  72  0.000000000003  Acidovorax sp. JS42  Bacteria  normal  0.518521  normal 
 
 
-
 
NC_013131  Caci_9002  single-strand binding protein  28.57 
 
 
148 aa  46.6  0.0001  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.850142  normal  0.715469 
 
 
-
 
NC_008752  Aave_2684  single-stranded DNA-binding protein  25.19 
 
 
132 aa  43.1  0.001  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.103821 
 
 
-
 
NC_007961  Nham_4669  single-strand binding protein  28.7 
 
 
159 aa  41.6  0.003  Nitrobacter hamburgensis X14  Bacteria  normal  0.309237  n/a   
 
 
-
 
NC_013037  Dfer_4439  single-strand binding protein  22.73 
 
 
170 aa  41.6  0.004  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_009668  Oant_3178  single-strand binding protein  26.79 
 
 
133 aa  40  0.01  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.198152  n/a   
 
 
-
 
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