Gene Nham_4669 details

Gene Information

• Locus tag: Nham_4669
• ID: 4025819
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007961
• Strand: +
• Start bp: 117151
• End bp: 117630
• Gene Length: 480 bp
• Protein Length: 159 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 637965147
• Product: single-strand binding protein
• Protein accession: YP_572055
• Protein GI: 92109769
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0629] Single-stranded DNA-binding protein
• TIGRFAM ID: [TIGR00621] single stranded DNA-binding protein (ssb)

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.309237
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCTGGCAG CTCCCGACGG TCTTTTCCGG GGCTCGTCGG AGGGACGGTC CCTCGGACGG 
AAGCAACGGA GAACTCAAAT GCAAAACATC GTCATTCTCG CCGGCAACAT CGGCCAGGAC 
CCGGAAAGCC GCAACACGCA GGGCGGCACC CGCATCACCC ACTTCACGCT GGCCACCTCG 
CGCCCGCGCT ACGAGGACGG CAAGGTCGTG CGAGACAAGG ACGGCTATCG CGTGCAGGAC 
ACCGAATGGC ACCGCATCAC CTGCTTCAAC GGCCTCGGCA AGACGGTCGA GCAGCACTGC 
GAGAAGGGCA TGCGGGTCCT GGTCCGGGGC CGCATCCACT ACACGAAGTG GCCCGACCAG 
CAGGGCAACG ACCGCTACGG CTGCGAGATC ATCGCCGAGA CGATCGACTT CCTGAGCCGG 
GCGAAGCAGA CCGAGAACGA GGACCGTGGC CAGTCCAGCG ACGACGAAAT CCCATTTTGA 

 

Protein sequence

MLAAPDGLFR GSSEGRSLGR KQRRTQMQNI VILAGNIGQD PESRNTQGGT RITHFTLATS 
RPRYEDGKVV RDKDGYRVQD TEWHRITCFN GLGKTVEQHC EKGMRVLVRG RIHYTKWPDQ 
QGNDRYGCEI IAETIDFLSR AKQTENEDRG QSSDDEIPF