Gene Caci_9002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_9002 
Symbol 
ID8340395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10412331 
End bp10412777 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content67% 
IMG OID644962092 
Productsingle-strand binding protein 
Protein accessionYP_003119656 
Protein GI256398092 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID[TIGR00621] single stranded DNA-binding protein (ssb) 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.850142 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.715469 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGCA ACAGCATCAC CCTGGTCGGC AACCTCACCG ACGCCCCGTC GCTGCGCTTC 
CTGGACAACG GCAGCAGCAT CGCCAACTTC ACGGTCGCCC ACACCGAGCG GGTCTTCGAC
AAGTCCTCGA ACGAGTGGAA GGACGGAGAC TCGGTGTACG TCCGCTGCGG TGTGTGGAAG
TCCGCCGGAG CGGAAAACGT CGCCGAATCG CTGTCGAAGG GCTCGCGCGT CATCGTGACC
GGCAAGCTGC GCCAGAACAA CTGGGTCACC GACAACGGCG AGAAGCGTTC CACTCTGAAC
CTGGAGGTCG AGGAGATCGG CGTCTCGCTC CGCTTCGCGG TCGCCACGCC GGTCAAGGCC
AGCCGCACCG CGCAGAGCGC CGCCCCGAGC CCGGACCCGT GGTCGATGCC CACTCCCGCC
ACCGCCGGTG CCGAACGGCC GTTCTGA
 
Protein sequence
MIGNSITLVG NLTDAPSLRF LDNGSSIANF TVAHTERVFD KSSNEWKDGD SVYVRCGVWK 
SAGAENVAES LSKGSRVIVT GKLRQNNWVT DNGEKRSTLN LEVEEIGVSL RFAVATPVKA
SRTAQSAAPS PDPWSMPTPA TAGAERPF