42 homologs were found in PanDaTox collection
for query gene Nham_3443 on replicon NC_007964
Organism: Nitrobacter hamburgensis X14



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007406  Nwi_0780  C4-dicarboxylate transporter/malic acid transport protein  91.04 
 
 		 357 aa  659    Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.439513  normal  1 
 
 
-
 
NC_007964  Nham_3443  C4-dicarboxylate transporter/malic acid transport protein  100 
 
 		 357 aa  709    Nitrobacter hamburgensis X14  Bacteria  normal  0.288016  n/a   
 
 
-
 
NC_011206  Lferr_1525  C4-dicarboxylate transporter/malic acid transport protein  54.03 
 
 		 362 aa  362  7.0000000000000005e-99  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.0288585  normal  0.364123 
 
 
-
 
NC_011761  AFE_1847  C4-dicarboxylate transporter/malic acid transport protein, putative  54.03 
 
 		 362 aa  362  7.0000000000000005e-99  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  1  n/a   
 
 
-
 
NC_007484  Noc_0077  C4-dicarboxylate transporter/malic acid transport protein  51.28 
 
 		 360 aa  347  1e-94  Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
-
 
NC_007908  Rfer_4140  C4-dicarboxylate transporter/malic acid transport protein  57.78 
 
 		 374 aa  343  2.9999999999999997e-93  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_011992  Dtpsy_2801  C4-dicarboxylate transporter/malic acid transport protein  60.3 
 
 		 356 aa  332  6e-90  Acidovorax ebreus TPSY  Bacteria  normal  0.518701  n/a   
 
 
-
 
NC_011145  AnaeK_2079  C4-dicarboxylate transporter/malic acid transport protein  50.63 
 
 		 387 aa  291  1e-77  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_2173  C4-dicarboxylate transporter/malic acid transport protein  50.31 
 
 		 387 aa  291  1e-77  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007760  Adeh_1761  C4-dicarboxylate transporter/malic acid transport protein  49.55 
 
 		 387 aa  288  7e-77  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.41649  n/a   
 
 
-
 
NC_008782  Ajs_3478  C4-dicarboxylate transporter/malic acid transport protein  62.41 
 
 		 292 aa  284  2.0000000000000002e-75  Acidovorax sp. JS42  Bacteria  normal  0.0270093  normal  0.289864 
 
 
-
 
NC_013730  Slin_0133  C4-dicarboxylate transporter/malic acid transport protein  42.43 
 
 		 351 aa  258  1e-67  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008699  Noca_3979  C4-dicarboxylate transporter/malic acid transport protein  35 
 
 		 352 aa  185  1.0000000000000001e-45  Nocardioides sp. JS614  Bacteria  normal  0.894801  n/a   
 
 
-
 
NC_007614  Nmul_A2613  putative C4-dicarboxylate transporter  35.15 
 
 		 367 aa  154  2e-36  Nitrosospira multiformis ATCC 25196  Bacteria  normal  1  n/a   
 
 
-
 
NC_009440  Msed_1271  hypothetical protein  35.74 
 
 		 351 aa  153  4e-36  Metallosphaera sedula DSM 5348  Archaea  normal  1  normal  1 
 
 
-
 
NC_013235  Namu_3702  C4-dicarboxylate transporter/malic acid transport protein  29.17 
 
 		 348 aa  149  9e-35  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0322958  normal  0.371988 
 
 
-
 
NC_013172  Bfae_22500  tellurite resistance protein-like permease  34.94 
 
 		 357 aa  130  3e-29  Brachybacterium faecium DSM 4810  Bacteria  normal  0.675884  n/a   
 
 
-
 
NC_009565  TBFG_11752  hypothetical protein  37.82 
 
 		 197 aa  114  2.0000000000000002e-24  Mycobacterium tuberculosis F11  Bacteria  normal  1  normal  0.150878 
 
 
-
 
NC_013216  Dtox_3375  C4-dicarboxylate transporter/malic acid transport protein  24.93 
 
 		 353 aa  82  0.00000000000002  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.646539  normal  1 
 
 
-
 
NC_013131  Caci_5803  C4-dicarboxylate transporter/malic acid transport protein  29.72 
 
 		 429 aa  68.2  0.0000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011761  AFE_1992  C4-dicarboxylate transporter/malic acid transport protein  24.84 
 
 		 400 aa  66.6  0.0000000006  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  1  n/a   
 
 
-
 
NC_011206  Lferr_1661  C4-dicarboxylate transporter/malic acid transport protein  24.84 
 
 		 400 aa  66.6  0.0000000006  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  1  normal  0.431835 
 
 
-
 
NC_007005  Psyr_1479  C4-dicarboxylate transporter/malic acid transport protein  24.35 
 
 		 389 aa  66.6  0.0000000006  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.805909  normal  1 
 
 
-
 
NC_011126  HY04AAS1_1047  C4-dicarboxylate transporter/malic acid transport protein  23.87 
 
 		 387 aa  65.9  0.000000001  Hydrogenobaculum sp. Y04AAS1  Bacteria  decreased coverage  0.000000000418188  n/a   
 
 
-
 
NC_004578  PSPTO_4613  C4-dicarboxylate transporter/malic acid transport protein  24.62 
 
 		 389 aa  65.5  0.000000002  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.522364  n/a   
 
 
-
 
NC_010581  Bind_2472  C4-dicarboxylate transporter/malic acid transport protein  24.93 
 
 		 419 aa  63.9  0.000000004  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009439  Pmen_0457  C4-dicarboxylate transporter/malic acid transport protein  25.77 
 
 		 384 aa  63.9  0.000000004  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007650  BTH_II1616  C4-dicarboxylate transporter/malic acid transport protein, putative  24.6 
 
 		 381 aa  62.8  0.00000001  Burkholderia thailandensis E264  Bacteria  normal  0.195431  n/a   
 
 
-
 
NC_009338  Mflv_2282  C4-dicarboxylate transporter/malic acid transport protein  26.49 
 
 		 404 aa  61.2  0.00000003  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  0.522283 
 
 
-
 
NC_013739  Cwoe_1488  respiratory nitrate reductase, gamma subunit  26.2 
 
 		 585 aa  59.3  0.0000001  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  0.269465 
 
 
-
 
NC_007298  Daro_0680  C4-dicarboxylate transporter/malic acid transport protein  22.62 
 
 		 346 aa  58.5  0.0000001  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011206  Lferr_0042  C4-dicarboxylate transporter/malic acid transport protein  23.26 
 
 		 402 aa  57.8  0.0000003  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.120445  normal  1 
 
 
-
 
NC_009484  Acry_2615  C4-dicarboxylate transporter/malic acid transport protein  25.23 
 
 		 429 aa  57.4  0.0000004  Acidiphilium cryptum JF-5  Bacteria  normal  0.298091  n/a   
 
 
-
 
NC_011761  AFE_0041  C4-dicarboxylate transporter/malic acid transport protein  23.26 
 
 		 385 aa  57.4  0.0000004  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.299856  n/a   
 
 
-
 
NC_008726  Mvan_4384  C4-dicarboxylate transporter/malic acid transport protein  25.22 
 
 		 374 aa  56.6  0.0000007  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013926  Aboo_0404  C4-dicarboxylate transporter/malic acid transport protein  23.34 
 
 		 343 aa  55.8  0.000001  Aciduliprofundum boonei T469  Archaea  normal  1  n/a   
 
 
-
 
NC_013205  Aaci_2914  C4-dicarboxylate transporter/malic acid transport protein  23.34 
 
 		 369 aa  50.8  0.00003  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_012034  Athe_2212  C4-dicarboxylate transporter/malic acid transport protein  18.54 
 
 		 347 aa  48.9  0.0001  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.000186594  n/a   
 
 
-
 
NC_007492  Pfl01_1664  C4-dicarboxylate transporter/malic acid transport protein  22.07 
 
 		 383 aa  48.9  0.0001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.537362  normal  0.0255572 
 
 
-
 
NC_006670  CNA05110  sulfite transporter, putative  23.08 
 
 		 517 aa  45.8  0.001  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  1  n/a   
 
 
-
 
NC_008537  Arth_4391  C4-dicarboxylate transporter/malic acid transport protein  26.44 
 
 		 395 aa  44.7  0.003  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_008340  Mlg_1275  C4-dicarboxylate transporter/malic acid transport protein  22.83 
 
 		 323 aa  43.1  0.008  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.360246  normal  1 
 
 
-
 
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