19 homologs were found in PanDaTox collection
for query gene Ndas_4279 on replicon NC_014210
Organism: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014210  Ndas_4279  Cell wall assembly/cell proliferation coordinating protein, KNR4  100 
 
 
718 aa  1401    Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_2651  Cell wall assembly/cell proliferation coordinating protein, KNR4  56.3 
 
 
506 aa  501  1e-140  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.144451  normal  0.54026 
 
 
-
 
NC_008148  Rxyl_2599  alpha-1,2-mannosidase, putative  42.25 
 
 
1322 aa  112  2.0000000000000002e-23  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_6161  alpha-1,2-mannosidase  42.31 
 
 
1426 aa  112  3e-23  Actinosynnema mirum DSM 43827  Bacteria  normal  0.241568  n/a   
 
 
-
 
NC_009380  Strop_3265  putative alpha-1,2-mannosidase  42.61 
 
 
1427 aa  100  1e-19  Salinispora tropica CNB-440  Bacteria  normal  normal  0.454408 
 
 
-
 
NC_009953  Sare_3495  putative alpha-1,2-mannosidase  40.87 
 
 
1422 aa  96.3  2e-18  Salinispora arenicola CNS-205  Bacteria  normal  0.129692  decreased coverage  0.00652278 
 
 
-
 
NC_013132  Cpin_0334  Fibronectin type III domain protein  36.92 
 
 
861 aa  89.4  2e-16  Chitinophaga pinensis DSM 2588  Bacteria  unclonable  0.00000091275  normal  0.913538 
 
 
-
 
NC_008752  Aave_2675  coagulation factor 5/8 type domain-containing protein  35 
 
 
834 aa  86.7  0.000000000000001  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.343316 
 
 
-
 
NC_012880  Dd703_3437  PKD domain containing protein  41.96 
 
 
487 aa  82.4  0.00000000000003  Dickeya dadantii Ech703  Bacteria  normal  0.639471  n/a   
 
 
-
 
NC_003910  CPS_2654  PKD domain-containing protein  31.45 
 
 
690 aa  77  0.000000000001  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_0296  coagulation factor 5/8 type protein  36.84 
 
 
954 aa  71.2  0.00000000006  Shewanella amazonensis SB2B  Bacteria  normal  0.464689  normal 
 
 
-
 
NC_013132  Cpin_1786  hypothetical protein  33.06 
 
 
475 aa  71.2  0.00000000007  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_5834  PKD domain-containing protein  37.17 
 
 
206 aa  67.4  0.0000000009  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.552498  normal  0.42039 
 
 
-
 
NC_012917  PC1_1084  coagulation factor 5/8 type domain protein  30.86 
 
 
675 aa  67.4  0.000000001  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  unclonable  0.00047148  n/a   
 
 
-
 
NC_008228  Patl_0123  coagulation factor 5/8 type-like  29.21 
 
 
944 aa  60.1  0.0000001  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_2646  PKD domain-containing protein  30.87 
 
 
540 aa  59.3  0.0000002  Colwellia psychrerythraea 34H  Bacteria  normal  0.671954  n/a   
 
 
-
 
NC_012669  Bcav_3003  alpha-1,2-mannosidase  34.71 
 
 
1053 aa  58.5  0.0000005  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.671088  normal 
 
 
-
 
NC_013172  Bfae_22340  alpha-1,2-mannosidase, putative  36.25 
 
 
1073 aa  48.9  0.0003  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2076  alpha-1,2-mannosidase  32.29 
 
 
1124 aa  47.8  0.0008  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>