| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2646 |
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| Symbol | |
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| ID | 3521766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 2749181 |
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| End bp | 2750803 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637285100 |
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| Product | PKD domain-containing protein |
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| Protein accession | YP_269360 |
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| Protein GI | 71281295 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.671954 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTGA TAAAAATGCT TACCATGGCT GTTATGTCCG GGGGGCTAGT TGCTTGTGTT
ACAGCAGATA AACTAGAAAG AGAAGCAACG CAGGAGGCGG TATCTGCTGC GTCGGTTAAC
TTTCTTGATT TACCTTTTTC AACGACAACA GAGCATAAAG ATTCACCTAC GACAGAAGGC
GTTAATAATC TGTTCGATGG AGACAAAGGC TCTAAATTTT TAGCAATGCA TAAATCGGCC
TGGGTTATTT TTAATACTCA AAAACCTAAA GTTCTTTCCA GTTATCAGGT TACCTCTGCT
GGTGACGCGC CAGGTAGAGA TCCTAAAGAA TGGATACTTG AAGCTTCTAA TGATGATACA
CATTGGACAA CCATTGATAC TCGAGGCGAG CAGAAATTTA ATGGTCGAGG AGTCACGAAC
GAATACCAGA TTGCGGGTAA CACAACAAAG TATTCTCAGT ACCGATATCA CTTTACTCAG
ACAAAACCGA CGACCTGGGG TGATACCTAC TTACAAATTG CAGAGCTGGA GCTACGAGGT
ATTACTAAAG AGCCAGTTGC GCAGTTCTCG GCATCGGCAA CCAAAGTTAA GTTTGATCAA
GAAATTTCTT TTAAGGATGA GTCACCTAAC TCACCAACAG AATGGCATTG GACTTTTGAA
AATGCTACGC CTGCCACCAG TAATGAAAGA AACCCTAAGG TGGTCTTTAA CAAACCAGGT
GGCCATGATG TTAGCTTAAC TGTTAAAAAT AAATTTGGTG CACACACCAA GCTTAATAAG
CGTTTTGTTG TTTCTTACGA TCCAGCTAAC CCTTGGCAAG GTTTTCACTA TCCAAAAGTA
ATACTGGCAC ATCAAGATAC TAATTCGGAA GGTTTTAAGC GAGTCAATCG AATTGTTCCT
GACTTAATTG GAGCAATTAA TGAGGTCTCT CTGGAGGTGT GTAAAAATCT TTACCGCAAT
ATTACTGAAG TGCCTGAATT TGATACCGTG ACTTTTCAGT ATAACTGGAG TGACGTGTTA
GCTGCACGTG GTGGCTCAGG TAAAAATATG CAGCTTTATT TTAGTACTCG ATATCTGCAA
TATGCCCTAG CTGATCAGCC TGACGATGCT GTAAAATATG AGATTTACGG TGTATTCTGG
CATGAACTTG TACATGGTTA TCAATCACAG CCAGAAACTA TTAAAGATCT ATATGCGTCT
GGTCATGATT ATTATGCGTT TCTTGAAGGG GTTGCTGATC TGGTGCGTAT CAGAGGCAGG
CATCATCTAA CTCGTTCACC GGATACAGGA AGCATTAATC GACAAACTCA AGTCAATGAT
CGTTATCTTT CGGGTTATAC AACAACGGGA TTTTTCTTAA ATTGGATTGC TGATAATTAT
GATTCAGAGT TTACTTACAA ATTTAATCAG TCACCACTAA AAATTAAACC TTGGAGTTTT
AAAGTAGCAA TTAAAGATAT TCTTAATGAA GATGTTGATG ACTTATGGAG TAAATACACG
GTTTATGTGG AGCAATATAA TAAAAAACAT CCGAACAAAA GGTTAAAATT ACCTGAATGG
AAAGGGAAGT CAAAGGTGTT AACTAACCAT AGAAATATGA AGGATGAAAA CAGGGCTCGT
TAA
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| Protein sequence | MKLIKMLTMA VMSGGLVACV TADKLEREAT QEAVSAASVN FLDLPFSTTT EHKDSPTTEG
VNNLFDGDKG SKFLAMHKSA WVIFNTQKPK VLSSYQVTSA GDAPGRDPKE WILEASNDDT
HWTTIDTRGE QKFNGRGVTN EYQIAGNTTK YSQYRYHFTQ TKPTTWGDTY LQIAELELRG
ITKEPVAQFS ASATKVKFDQ EISFKDESPN SPTEWHWTFE NATPATSNER NPKVVFNKPG
GHDVSLTVKN KFGAHTKLNK RFVVSYDPAN PWQGFHYPKV ILAHQDTNSE GFKRVNRIVP
DLIGAINEVS LEVCKNLYRN ITEVPEFDTV TFQYNWSDVL AARGGSGKNM QLYFSTRYLQ
YALADQPDDA VKYEIYGVFW HELVHGYQSQ PETIKDLYAS GHDYYAFLEG VADLVRIRGR
HHLTRSPDTG SINRQTQVND RYLSGYTTTG FFLNWIADNY DSEFTYKFNQ SPLKIKPWSF
KVAIKDILNE DVDDLWSKYT VYVEQYNKKH PNKRLKLPEW KGKSKVLTNH RNMKDENRAR
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