Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0334 |
Symbol | |
ID | 8356439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 393437 |
End bp | 396022 |
Gene Length | 2586 bp |
Protein Length | 861 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644962480 |
Product | Fibronectin type III domain protein |
Protein accession | YP_003120034 |
Protein GI | 256419381 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000091275 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.913538 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTAATT TTACAAAGGC ATCTTTGTAT GTGGCCCTCC TATGCGCTAC CGTGCCGGCA CTAGCTCAGA CGAACATTAC GTCTACAGCA GGTTCGCTGA CCGCGCAGTA TGGAAATTCC AACGCCGTGG AAAACTATCC GAAGTTGATA GACAACAACA CCAGTACGAA GTATTACATT GACAAAACGT CCCTTTGGGT TCAATTCGAA GCGGCAAGAT CCGCCGTTGT TACCCAGTAC TCAATTACCT CTGCAAACGA TTATGCTGAC CGCGATCCAA AGAACTGGAA TCTGCAGGCA TCGAATGATG GTAAAACATG GACTACGTTG AACACGCAGA CCAACCAGGC ATTTGCCAGT CGTTTTCTGA CAAAAACCTA TTCCTTTACC AACACAACTG CTTACACTAT TTACCGCCTG AATGTTATTG CGAATAATGG CGCAGGCGCT ATTCAGATAG CAGAGTGGCA ATTGCAGGGA ACATTGACAG GACCTGCTTC CGGACCTACG AATGTGACTG CCACCGTTCA ATCAGGTTAT AAAATAAACC TGACCTGGTC GGACAATGCC ACCAACGAAA CCGGTTACCG TATCGAAAGC TCACTGGATG CGGTTAATTT CCTGACACGT GCTACTGTTG CTGCAAATGC AACTACTTAC ACAGATAGCG CACTGAGTGC AGGTACCAGC TTTATCTACC GCGTAAGAGC GGTAAATGCG ACAGGTGTAT CTTCCGCAGA TACTTCCGAT GTTGTGAAAA CAAGCGTGGC TCCTTCCGGA TTTGATATCA CCAATTACAC GAACGCAAAG TTCAACGATC CGTATAATAC AACTGGTGCT GAAGGATTGG ATAAAGCTTT TGATAACAGC CCTTATACCA AATACCTGGC GTGGGCGGCT ACAACTGCTA TTGGTTATTC CCTGCCAGGT GGCGCCGTAG CTACACAATA CAGCATTACT TCTGCGAATG ATGCATCAGA TCGCGATCCA CGCAACTGGA CCTTCCAGGG TTCCAATGAC AGTACTAACT GGACAAACCT GCAGGTAGTA ACAGACCAGC AGTTTACTGC CCGTTATAAG AAACGTACTT ATGTATTCCC TAACACAACT TCTTATAAGT ATTACCGTTT GAATATTACT GCGAATAATG GCGCGTCTAT TACTCAGTTG TCAGAATTCG AAATCATCGG TACCGGCACA GGTACGGTGA ATACAGGTGT TCCTGCTGCT CCGACAGGCT TTACGACGCA GTCGGTATCG AGCAACCAGA TCATCCTGGA TTGGGCGGAT GCTGCAAGTA CAGAAACTAA TTACCGTCTT GAAAGAACGA CAGATACGCT GAACTGGAAC ACAGCATTTG TATTACCAGT AAATACGACG CATTTCTATT CTCTCGACCT GTCTCCGCTG ACGAAATATT ATTACCGTCT CAGGGCAGAA AATGCGAATG GTGCATCTGC ATGGGTAACT GGCAACAATA CCACATTGAC GGCTACACCG AAATCAGTAT GGCAGGAACA TTGGTTTGCG CATGTAGAAC CATTGACCCT GAACTATTCT AACAGTAGTG TGAACATCTA TTTTGATGCG GCGGTAAGTC CGTCTATTAC CTGGATGAAC CAGGATTTCA CGAATGTATG GGAGTATGTA AAACAGAACT ACGGTTCTTT CAGCGATCCT AAGCTGAACA TGGTGTTCCA TAGTAAAGCA GGTTATTCCG GTGGTCACCC TGCGAATGTA TTCGATGCTT CTCATGACTA TGCGAATGTG GGCGATCTTG GTGGTAGCTG GGCTACCCGT GAGGGCTGGA ACCTGCACGC GTCTATTCAT GAAGTAGGCC ATATCGTAGA AGGTGGCAGC AAAGGCGTAC ATAATTCACC TTCTTTTCCG ATCTGGGGAG ATAGCAAATG GGCTGAAATC TTCATCTATG ATGTAATGAA ACGTCTGGGA TGGTCAGCTG ATGCACAGCA GGCATACAAT GACTTTGTGG TGAAAGCAGA GAGCTTCCCT AGTCCGGATA CTTACTGGTT CCGTGACTGG TTCTATCCGA TCTACGACAG AGCGGATTCC AGTGCTGCGT TGAACAGGTA TTTCGAGCTG TTATCACAGT ATTTCCCGCA ACATAATGGC GAATACACCC GTGACCTGAA CCTGGGTGAG TTTGTGCATT TCTGGAGTGG CGCGGCTCAG TTCAGTCTGG AACTGCAGGC TGATACTGCA TTTGGTTGGA CCAAACAACT GGAGATGCAG TTCAAACAGG CACAGATCGA TTTTCCGTTT ACCTATCCAC AGCCATTGTT AGCACCGGCT GTAGCGGCTG TACCGGAAAA GAAAGCTGCT GTGTTGAACA TCTGGCCTAA CCCTGCGAGC AACGTACTGA ATCTTTCCCT GCCAGATGCA GTGAAGGTGT ACAATGTGGA TATCTACAAT ATCGCTGGTG TGAAAAGAGT GTCTCAGCGT ATCAAAGGCA ATTACAATAG TCTGAGCATT TCATCCCTGC CGGATGGTGT ATATATTGTG ACTGTTACTG ATGATAAAAA GATCATTCAC CGTCAGAAGA TCGTGGTAAG TAATACGAAC CGCTAA
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Protein sequence | MLNFTKASLY VALLCATVPA LAQTNITSTA GSLTAQYGNS NAVENYPKLI DNNTSTKYYI DKTSLWVQFE AARSAVVTQY SITSANDYAD RDPKNWNLQA SNDGKTWTTL NTQTNQAFAS RFLTKTYSFT NTTAYTIYRL NVIANNGAGA IQIAEWQLQG TLTGPASGPT NVTATVQSGY KINLTWSDNA TNETGYRIES SLDAVNFLTR ATVAANATTY TDSALSAGTS FIYRVRAVNA TGVSSADTSD VVKTSVAPSG FDITNYTNAK FNDPYNTTGA EGLDKAFDNS PYTKYLAWAA TTAIGYSLPG GAVATQYSIT SANDASDRDP RNWTFQGSND STNWTNLQVV TDQQFTARYK KRTYVFPNTT SYKYYRLNIT ANNGASITQL SEFEIIGTGT GTVNTGVPAA PTGFTTQSVS SNQIILDWAD AASTETNYRL ERTTDTLNWN TAFVLPVNTT HFYSLDLSPL TKYYYRLRAE NANGASAWVT GNNTTLTATP KSVWQEHWFA HVEPLTLNYS NSSVNIYFDA AVSPSITWMN QDFTNVWEYV KQNYGSFSDP KLNMVFHSKA GYSGGHPANV FDASHDYANV GDLGGSWATR EGWNLHASIH EVGHIVEGGS KGVHNSPSFP IWGDSKWAEI FIYDVMKRLG WSADAQQAYN DFVVKAESFP SPDTYWFRDW FYPIYDRADS SAALNRYFEL LSQYFPQHNG EYTRDLNLGE FVHFWSGAAQ FSLELQADTA FGWTKQLEMQ FKQAQIDFPF TYPQPLLAPA VAAVPEKKAA VLNIWPNPAS NVLNLSLPDA VKVYNVDIYN IAGVKRVSQR IKGNYNSLSI SSLPDGVYIV TVTDDKKIIH RQKIVVSNTN R
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