Gene PC1_1084 details

Gene Information

• Locus tag: PC1_1084
• ID: 8132013
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: +
• Start bp: 1261352
• End bp: 1263379
• Gene Length: 2028 bp
• Protein Length: 675 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 644864367
• Product: coagulation factor 5/8 type domain protein
• Protein accession: YP_003016669
• Protein GI: 253687479

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.00047148
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAGCG TAAATATTGA AATCAATGTC TGTGGCAGCG CAGAAAAATC AACGTGTGTT 
GTTAATCCCC CAATTCAGAT CAATCCTCAC ACCTGTTGCC AGGTGGATAC GGATAATCAG 
TGCGAACCGC AACCTGGCGT TTCCGGTGTT GCCTCCGTAT TCGGACGGAC TGGCGTTGTC 
ACTGCACAAT CAGGCGACTA TACGGCCGAT CAGATTACGG AAACGGACAC CAGAAAATTT 
GCCTCGTCGG ATGAAAAAGC GGTCTGGAAT GCAAAGCAGG ATGCATTAAT TTCCGGTACC 
ACTATCCGCA CGCTCTTTGG GCAGTCGCTG CTGGGCAGCG GTGATCTTTC ACCTACGCCA 
GCGCAAATGG GTGTCGCGGC GGTTGGGCAT ACTCACACCA CAGCGGACAT CACCGACTAC 
ACATCAAAAA CGAAGCAGCT CATTCATTCC TCGCTGGAAG CCGGGGCGGG CGTCACGCTG 
AGCTATAACC CGGTGAATGA GAAAACCATT ATCAGCGCTG CAGGCGGTGG TTCGGGTTCG 
GGTACGGGCG GTTCTGGTTA TATCGTAGCC GATCGTCAGG GCGCAACGGC GGGGCAAAAT 
CACGCGTTCA GCATTAGCCC ACAAAGCATG TTTAATCTCG CGGCGTATGC GCTGAAAGAA 
GTCGCTGGCG CAGCGAATCA GACTTATGTT GTTGACGATT TCGGCGTGTC TAGCGAAGAG 
AACTACAACG TAACTCATGC TGCTGTTTTT GATAATACAT TACTCCCCTA TGTCGGAAAG 
CTATATAACC TGGTGCAATC CGGTAATTTT TATTCGTCAC CAATTAAATC AGACGGTGAA 
AGCATTGAAA TTGATGCTGT TAATAAAACG CTGATTCCTG TGATGACAGC AAATAATAGT 
GCAGTTGGCT ACACGGTTGA CGCATCGTCT GAGTATTCAG TGCAATACGC GGCGTGGACA 
GCATTCAACG GAACGTTAAA TCGATACTGG GCATCCAAAA CCGTACCAAC AGTGGCTAAC 
CCACATTGGC TGCGTATTAC TATGGCGGCT CCTGCATTAA TTGATACATA CAGAATAACA 
AACGAAAACC TGAATCCTGG GCCACTCAGC CCGAAATCGT GGACGTTTCA GGGGAGTAAT 
GATGGTACAA CGTGGCATAC ATTACATACG GTATCTAATG ATACTCGCGA TGGGAAGGGG 
GCGGTTCGAG AATATACGTT CACCAATGAC ACGCCGTATT CATCATTCCG TATTTTAATA 
ACCGAGCAAA ATGCTGGTCC ACACGTTCAA ATTGGGGAGC TTGAAATATT CCGCAGAGAG 
CGACTGTTGA TTAACGGCAG TGATGGTAAG TGGTATTCAG CGAATAATGG AGTATTAACA 
TCGGTCCCAG CACCATCTGT GGCGGAAGAT TTTTATAATA ATGGTTTTTT GTCATCTGGC 
GTAATATCTG AATCATCATT GTCAGGAATA CAGCCAGTAA CGATTTTTTC ATCAAAAAAT 
ATTGATGCAA AAGTGCTATA TACACCGCCT CCTCAAATTG CAATACAGAA AGCCCTGTCG 
AGCGCGGCGT TATGGCCACA AATTAACTCC GCAGTGCTGA CAGCTACGCA AACCGGCAAC 
GGTAAAGTGC GTGTCGCTGT GACGCGGGAC TTGGTTAACT GGCATGTGTG GCGGAGCGGG 
GCGTGGGTTG ATGTGGGGGC GTTGTCAGTA GATACGGCGG GCGCAACGAA ACTGATTGCA 
GACGGCATGA CGCCAGCTGA ACTCGGTGCT ATTACGGCGG CACAGTGGAC ACAGCTGTTT 
GCATCCAATA ACGCTGTGCC GGACTCACTT GCCTTTGCCT TCGCGCTTGA TATCACCGAT 
CCAGCGACTG ATATCGCGGC TGTTGACCGA CTGGTGCTGA ACGTCAACGA TGCGTCCAGT 
TGGAAACTGC AGTCCCCTGC GGAAGTGGAA ATCCGCTGGC GCACGGACAG TGTGACATTC 
CGCACCGTAA CGGCAGGCAA TTACAAGCTG GCGTATCAGG TTCCGTAA 

 

Protein sequence

MKSVNIEINV CGSAEKSTCV VNPPIQINPH TCCQVDTDNQ CEPQPGVSGV ASVFGRTGVV 
TAQSGDYTAD QITETDTRKF ASSDEKAVWN AKQDALISGT TIRTLFGQSL LGSGDLSPTP 
AQMGVAAVGH THTTADITDY TSKTKQLIHS SLEAGAGVTL SYNPVNEKTI ISAAGGGSGS 
GTGGSGYIVA DRQGATAGQN HAFSISPQSM FNLAAYALKE VAGAANQTYV VDDFGVSSEE 
NYNVTHAAVF DNTLLPYVGK LYNLVQSGNF YSSPIKSDGE SIEIDAVNKT LIPVMTANNS 
AVGYTVDASS EYSVQYAAWT AFNGTLNRYW ASKTVPTVAN PHWLRITMAA PALIDTYRIT 
NENLNPGPLS PKSWTFQGSN DGTTWHTLHT VSNDTRDGKG AVREYTFTND TPYSSFRILI 
TEQNAGPHVQ IGELEIFRRE RLLINGSDGK WYSANNGVLT SVPAPSVAED FYNNGFLSSG 
VISESSLSGI QPVTIFSSKN IDAKVLYTPP PQIAIQKALS SAALWPQINS AVLTATQTGN 
GKVRVAVTRD LVNWHVWRSG AWVDVGALSV DTAGATKLIA DGMTPAELGA ITAAQWTQLF 
ASNNAVPDSL AFAFALDITD PATDIAAVDR LVLNVNDASS WKLQSPAEVE IRWRTDSVTF 
RTVTAGNYKL AYQVP