Gene Amir_6161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6161 
Symbol 
ID8330371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp7216436 
End bp7220716 
Gene Length4281 bp 
Protein Length1426 aa 
Translation table11 
GC content71% 
IMG OID644946594 
Productalpha-1,2-mannosidase 
Protein accessionYP_003103814 
Protein GI256380154 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3537] Putative alpha-1,2-mannosidase 
TIGRFAM ID[TIGR01180] alpha-1,2-mannosidase, putative 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.241568 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGCACA TGCGGGGCAG GCGGAGATCA TTCGCGGGTG CGCTGGCGAT ATCCGTGGCG 
CTGGCGGGCG TGCCAGTCTG GGGGCAGGCC ACCGCCGCCC CCGAGGAGCC GCCCGTGCGC
GAGACCGTCT TCGCCACCTC CTTCGAGGAG GGGCAACCGC TCCCCGACTG GGCGAGCACC
GTGGAGACCG GACCGGACGG GAAGCCGAGG ACGGGCGGCG TCAACGGCAA CGACTCCACC
GGCATCCCCG GCAACATCAC CGACCGCGTC ACCGCCGTCG CGGCCAACGC CGAGTACCCC
GAGTCGGACG AGGTGAAGGA GAACCTGGTC GACGGGAGCC CCAGCAGCAA GTGGCTGGCG
TTCACCGCGA CCGGCTGGCT GGAGTTCACC TTCGACGCGC CCGCGACCGT CGAGGACTAC
GCCCTCACCT CGGCCAACGA CGCCCCCGAG CGCGACCCCA AGGACTGGAA GCTCAGCGGG
TCCGACGACG GCGAGACCTG GACCGAGCTC GACGCCCGCA CCGGGCAGAC CTTCGCCGGG
CGGCACACCA CGGTCACCTA CGAGACCGGC AACACCACCG CCTACCGGCA CTACCGGATC
GACATCACCG CGAACCGGGG CGGCCAGGCC GTGCTCCAGC TCGCCGAGGT CACCTTCTCC
GACGGCTCCA CCTCCCCGCC CGCCGAGCAC ATGCGCACCA CCACCGGCGA GGGCGCCACG
GGGGCGTACA ACTCCCGCTC CCGCACCGGG TTCACCGGCA CGCGGGCGCT GCGCTACCAG
GGCACGCACA CCGCCCAGGG GCGCGGCCAC TCGTACAACA AGGTGTTCGA GGTCGACTTC
CCGGTCACCG CGACCACCGA GCTGTCCTAC CTGCTGTTCC CGTCGTTCAG CGCGGGCGAC
CTGCGCTACC CGTCCACGTA CGCGGCGCTG GACGTGGCGT TCTCCGACGG CACCTACCTG
AGCGAGCTGG GCGCGCGCGA CCAGCACGGG TTCGAGCTCT CGCCGAGGGG CCAGGGCGAG
TCGAAGGCGC TGTCCACGAA CCAGTGGAAC CGGGTCGCGT CGGTGATCGG GCAGGTCGCG
GCGGGCAAGA CCGCCAAGCG CATCCTGGTC GGCTACGACA ACCCGGCCGG TCCGGCCGCG
TTCAACGGCT GGGTCGACGA CGTGGCCGTG CACACCGCGC CCGAGGTGGT GGAGCACGCC
CGCCCGTCCG ACTGGGTGGT CACCACCAGG GGCACCAACT CCAGCGGCGG CTTCTCCAGG
GGCAACAACT TCCCGGCCAC CGCCGTGCCG CAGGGCTTCA ACTTCTGGTC CCCGATGACG
AACGCGGGGT CCACGAGCTG GATCTACGAG TACGCGAAGG CCAACAGCCG CACCACGAAC
CTGCCGTCGC TGCAGGCGTT CACCGCCAGC CACCAGCCGA GCCCGTGGAT GGGCGACCGG
CAGACGTTCC AGGTCATGCC GACCACCGGG ACGCCCACCG CCGACCGGGC GCTGCGCTCG
CTGCCGTTCA AGCACTCCAA CGAGATCGCG CAGGCGCACT ACTACGGCGT GGCGTTCGAG
AACGGCATGA GGACCGAGAT CGCGCCGACC GACCACGCGG CGGTGTTCCG GTTCACCTTC
GTCGACGACG CCTCGAACCT GGTGTTCGAC AACGTCAGCA ACGAGGGCGG GCTGACGCTG
GACGCCGAGA ACGGCGTGGT GAGCGGGTTC TCCGACGTGC GCAGCGGGTT GTCCGCGGGG
GCGACGCGGC TGTTCGTGTA CGGGGAGGTG GACCGGCCGG TCACCGGCAG CGGGAAGCTC
ACCGGGGCCG GGCGCGACAA CGTCGCCGGG TACCTGCGGT TCGACACCTC CGCCGAGAAG
ACCGTGACGC TGCGGATCGC GACCTCGCTG CTGGGCGTGG AGCAGGCCAG GAAGAACCTG
GACCTGGAGG TGTCCACTTC GGACACGTTC GAGTCGGTGC GCGACCGGGC GCAGGGCGCG
TGGGACGACA TCCTCGGCAA GGTCAAGGTC GAAGGCGCGA GCCAGGACCA GCTGACCACG
CTGTACTCCA ACCTGTACCG GCTGTACCTG TACCCGAACT CCGGCTTCGA GAACACCGGG
ACGGCGGCCG AGCCGAGGCA CCAGTACGCG AGCCCGGTGC GCGCGGGCGG GGCGAGCACG
CCGACGCGGA CCGGCGCGCA GGTCGTCGAC GGGAAGGTGT ACGTCAACAA CGGGTTCTGG
GACACCTACC GGACCACCTG GCCCGCGTAC AGCCTGCTGA CGCCGGAGAA GGCCGGTGAG
ATGGTCGACG GGTTCGTCGA GCAGTACCGG GACGGCGGCT GGATCTCCCG CTGGTCCTCC
CCCGGCTACG CGAACCTGAT GACCGGCACC AGCTCCGACG TGGCGTTCGC GGACGCGTAC
CTGAAGGGCG TCGGCGGGTT CGACGCGGAG GCGGCGTTCG CGGCGGCGGT GAAGAACGCG
ACGGTGACCC CGCCGAACGC GAGCGTGGGC CGCAAGGGGC TCGACACCTC GGTGTTCAAG
GGCTACACGT CCACCGCCAC CGGCGAGGGC ATGTCGTGGG CGCTGGAGGG CTACGTCAAC
GACTACGGCA TCGCCACCAT GGCCAAGGCG CTGCACGAGT CGACCGGCAA GGCGGAGTAC
CTGGAGCAGC ACGAGTACTT CCGCGAGCGC GCGCTGAACT ACGTGAACAT GTTCGACCCG
TCGGTCGGGT TCTTCCAGGG CCGCAAGCCG GACGGCGCGT GGCGGCTGCC CGCCGGGCAG
TACGACCCCG AGGTGTGGGG GCACGACTAC ACCGAGACCA ACGGCTGGAA CATGGCGTTC
ACCGTGCCGC ACGACGGGCA GGGGCTCGCG AACCTGCACG GCGGCAAGGA GGGGTTGGCG
AAGAAGCTGG ACCAGTTCTT CGCGACGCCC GAGACGGCCA CGAAGGTCGG GTCGTACGGC
GGGGTCATCC ACGAGATGCT CGAAGCGCGG GACGTGCGGA TGGGGCAGTA CGGGCACAGC
AACCAGCCCT CGCACCACAT CCCCTACATG TACGACTACG TCGGGCAGCC GTGGAAGACC
CAGGAGAAGG TGCGGGAGGT CCTGTCGCGG CTGTACCTGG GCAGCGAGAT CGGCCAGGGC
TACCCCGGCG ACGAGGACAA CGGCGAGCAG TCGGCGTGGT GGCTGTTCAG CGCGCTGGGG
TTCTACCCGC TGCAGATGGG CAGCGCGAGC TACGCGGTGG GGTCGCCGCT GTTCACCAAG
GCCACCGTGG ACCTGGGCGG CGGTCGCGAG TTCGTGGTGA ACGCGCCGGG CAACAGCGCG
TCGAACGTCT ACGTGCAGTC GTTGAAGGTC AACGGGAAGG CGTGGGACAA GGCGCACCTG
CCGCACTCGG TGCTCGCGGA CGGGGCGGTG CTGGACTTCG AGATGGGCGC GGCGCCGTCG
ACGTGGGCCA GCGGCGCGGA CGCCGCTCCG CCGTCGCTGA CCACGGGCCC GGCGGTGCCG
ACACCGCTGC GGGACGTGGT GACGGCCGCG TCGACGACCG CGTCCGGTCC GGTGGGGCCG
CTGGTGGACG ACACGTCGGC GACCGAGTCG GCGGTGTCGT GGGTGCAGGT CGCGGCGCCG
GACCGGCGGG AGAAGGCGGA GTTCTACACG CTGACGTCGG GAAGGGCGGC GGGCGCCGAT
CCCGGTTCGT GGGTGCTGAA GGGCTCGTAC GACGGGAAGA CGTGGGTCGC GGTGGACGAG
CGGTCCGGTC AGGAGTTCGT GGACCGGAAG CAGACGCGGG CGTTCAAGAT CGCGCGGCCG
GGGCACTACC GGCACTACCG GCTGGAGCTG TCGGGGTCGG CCGCGCTGGC GGAGTTCGAG
CTGCTGGCGA AGCCGTTCGC CACCTGCGAC CGGGTGGTGT CCGGTGAGCA CGCGGGCCCG
CTGACGGTCG GTTCGGGGAC GGTGTGCCTG ACCGGCGCGG TGGTGTCGGG GCCGGTCACG
GTCGGGTCGG GCGCGGCGCT GTACTCGTTC GACTCGGTGG TGCGCGGTCC GGTGTCGGCG
GCGGGCGCGT CGGCGGTGGT GCTGGTGGAG ACCGAGGTGG CCGGTCCGGT GTCGGTGACC
GGGACGACCG GCGAGGTCTC GCTGGAGCTG GCGCGCGTGT CCGGGCCGGT GAGCGTGGTG
GGCAACCGGG GCGGGACGCT GCTGGCGGGC AACGCCGTGG GCGGTCCCCT GTCGTGCACG
GCGGGCGACC CGGCCCCGGT GGACCACGGC TGGCCGAACG AGGTGCGGGG CCCGAAGTCG
GGGCAGTGCA CGGGGTTGTA G
 
Protein sequence
MGHMRGRRRS FAGALAISVA LAGVPVWGQA TAAPEEPPVR ETVFATSFEE GQPLPDWAST 
VETGPDGKPR TGGVNGNDST GIPGNITDRV TAVAANAEYP ESDEVKENLV DGSPSSKWLA
FTATGWLEFT FDAPATVEDY ALTSANDAPE RDPKDWKLSG SDDGETWTEL DARTGQTFAG
RHTTVTYETG NTTAYRHYRI DITANRGGQA VLQLAEVTFS DGSTSPPAEH MRTTTGEGAT
GAYNSRSRTG FTGTRALRYQ GTHTAQGRGH SYNKVFEVDF PVTATTELSY LLFPSFSAGD
LRYPSTYAAL DVAFSDGTYL SELGARDQHG FELSPRGQGE SKALSTNQWN RVASVIGQVA
AGKTAKRILV GYDNPAGPAA FNGWVDDVAV HTAPEVVEHA RPSDWVVTTR GTNSSGGFSR
GNNFPATAVP QGFNFWSPMT NAGSTSWIYE YAKANSRTTN LPSLQAFTAS HQPSPWMGDR
QTFQVMPTTG TPTADRALRS LPFKHSNEIA QAHYYGVAFE NGMRTEIAPT DHAAVFRFTF
VDDASNLVFD NVSNEGGLTL DAENGVVSGF SDVRSGLSAG ATRLFVYGEV DRPVTGSGKL
TGAGRDNVAG YLRFDTSAEK TVTLRIATSL LGVEQARKNL DLEVSTSDTF ESVRDRAQGA
WDDILGKVKV EGASQDQLTT LYSNLYRLYL YPNSGFENTG TAAEPRHQYA SPVRAGGAST
PTRTGAQVVD GKVYVNNGFW DTYRTTWPAY SLLTPEKAGE MVDGFVEQYR DGGWISRWSS
PGYANLMTGT SSDVAFADAY LKGVGGFDAE AAFAAAVKNA TVTPPNASVG RKGLDTSVFK
GYTSTATGEG MSWALEGYVN DYGIATMAKA LHESTGKAEY LEQHEYFRER ALNYVNMFDP
SVGFFQGRKP DGAWRLPAGQ YDPEVWGHDY TETNGWNMAF TVPHDGQGLA NLHGGKEGLA
KKLDQFFATP ETATKVGSYG GVIHEMLEAR DVRMGQYGHS NQPSHHIPYM YDYVGQPWKT
QEKVREVLSR LYLGSEIGQG YPGDEDNGEQ SAWWLFSALG FYPLQMGSAS YAVGSPLFTK
ATVDLGGGRE FVVNAPGNSA SNVYVQSLKV NGKAWDKAHL PHSVLADGAV LDFEMGAAPS
TWASGADAAP PSLTTGPAVP TPLRDVVTAA STTASGPVGP LVDDTSATES AVSWVQVAAP
DRREKAEFYT LTSGRAAGAD PGSWVLKGSY DGKTWVAVDE RSGQEFVDRK QTRAFKIARP
GHYRHYRLEL SGSAALAEFE LLAKPFATCD RVVSGEHAGP LTVGSGTVCL TGAVVSGPVT
VGSGAALYSF DSVVRGPVSA AGASAVVLVE TEVAGPVSVT GTTGEVSLEL ARVSGPVSVV
GNRGGTLLAG NAVGGPLSCT AGDPAPVDHG WPNEVRGPKS GQCTGL