More than 300 homologs were found in PanDaTox collection
for query gene Krad_2543 on replicon NC_009664
Organism: Kineococcus radiotolerans SRS30216



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009664  Krad_2543  binding-protein-dependent transport systems inner membrane component  100 
 
 
300 aa  588  1e-167  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2317  binding-protein-dependent transport systems inner membrane component  35.97 
 
 
299 aa  181  1e-44  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_3620  binding-protein-dependent transport systems inner membrane component  36.39 
 
 
302 aa  179  4.999999999999999e-44  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2135  binding-protein-dependent transport systems inner membrane component  36.55 
 
 
296 aa  179  5.999999999999999e-44  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2512  binding-protein-dependent transport systems inner membrane component  40.75 
 
 
292 aa  176  5e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.660216  n/a   
 
 
-
 
NC_009767  Rcas_0515  binding-protein-dependent transport systems inner membrane component  40.16 
 
 
302 aa  176  5e-43  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2522  binding-protein-dependent transport systems inner membrane component  39.33 
 
 
297 aa  175  7e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000227991  n/a   
 
 
-
 
NC_009523  RoseRS_1358  binding-protein-dependent transport systems inner membrane component  36.55 
 
 
291 aa  175  8e-43  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2216  binding-protein-dependent transport systems inner membrane component  36.63 
 
 
301 aa  174  9.999999999999999e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_3565  binding-protein-dependent transport systems inner membrane component  37.94 
 
 
291 aa  173  2.9999999999999996e-42  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.276199 
 
 
-
 
NC_009523  RoseRS_2820  binding-protein-dependent transport systems inner membrane component  36.12 
 
 
299 aa  171  1e-41  Roseiflexus sp. RS-1  Bacteria  hitchhiker  0.0050805  normal 
 
 
-
 
NC_013525  Tter_0264  binding-protein-dependent transport systems inner membrane component  40.68 
 
 
307 aa  170  3e-41  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012669  Bcav_0312  binding-protein-dependent transport systems inner membrane component  40.07 
 
 
298 aa  168  1e-40  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_2544  binding-protein-dependent transport systems inner membrane component  36.04 
 
 
299 aa  166  4e-40  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.238071  normal  0.0688071 
 
 
-
 
NC_013521  Sked_05440  carbohydrate ABC transporter membrane protein  34.56 
 
 
307 aa  166  5e-40  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.050978  normal 
 
 
-
 
NC_013526  Tter_2507  binding-protein-dependent transport systems inner membrane component  38.36 
 
 
296 aa  165  8e-40  Thermobaculum terrenum ATCC BAA-798  Bacteria  decreased coverage  0.00000371485  n/a   
 
 
-
 
NC_013131  Caci_4986  binding-protein-dependent transport systems inner membrane component  33 
 
 
301 aa  162  4.0000000000000004e-39  Catenulispora acidiphila DSM 44928  Bacteria  hitchhiker  0.00963253  hitchhiker  0.006941 
 
 
-
 
NC_013525  Tter_0506  binding-protein-dependent transport systems inner membrane component  31.08 
 
 
294 aa  160  2e-38  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013093  Amir_2918  binding-protein-dependent transport systems inner membrane component  34.64 
 
 
290 aa  158  9e-38  Actinosynnema mirum DSM 43827  Bacteria  normal  0.787566  n/a   
 
 
-
 
NC_014213  Mesil_3228  binding-protein-dependent transport systems inner membrane component  41.67 
 
 
272 aa  156  3e-37  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00685083  normal 
 
 
-
 
NC_011831  Cagg_1688  binding-protein-dependent transport systems inner membrane component  39.53 
 
 
354 aa  157  3e-37  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_014213  Mesil_3420  proteophosphoglycan ppg4  41.67 
 
 
272 aa  156  3e-37  Meiothermus silvanus DSM 9946  Bacteria  normal  0.257772  normal 
 
 
-
 
NC_013526  Tter_2452  binding-protein-dependent transport systems inner membrane component  37.4 
 
 
299 aa  156  4e-37  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.0352539  n/a   
 
 
-
 
NC_011661  Dtur_0439  binding-protein-dependent transport systems inner membrane component  31.6 
 
 
279 aa  155  5.0000000000000005e-37  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.0806983  n/a   
 
 
-
 
NC_013131  Caci_3806  binding-protein-dependent transport systems inner membrane component  32.34 
 
 
300 aa  156  5.0000000000000005e-37  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_4196  binding-protein-dependent transport systems inner membrane component  34.95 
 
 
292 aa  155  9e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0185  binding-protein-dependent transport systems inner membrane component  35.19 
 
 
301 aa  155  1e-36  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013530  Xcel_0899  binding-protein-dependent transport systems inner membrane component  34.69 
 
 
308 aa  154  2e-36  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.408611  n/a   
 
 
-
 
NC_008541  Arth_3322  binding-protein-dependent transport systems inner membrane component  32.23 
 
 
309 aa  153  4e-36  Arthrobacter sp. FB24  Bacteria  normal  0.0903437  n/a   
 
 
-
 
NC_010001  Cphy_3400  binding-protein-dependent transport systems inner membrane component  30.94 
 
 
283 aa  153  4e-36  Clostridium phytofermentans ISDg  Bacteria  normal  0.372936  n/a   
 
 
-
 
NC_013521  Sked_27710  ABC-type sugar transport system, permease component  31.49 
 
 
309 aa  152  7e-36  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.935575  normal  0.331014 
 
 
-
 
NC_011368  Rleg2_5351  binding-protein-dependent transport systems inner membrane component  33.44 
 
 
294 aa  152  8.999999999999999e-36  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.466926 
 
 
-
 
NC_011886  Achl_3122  binding-protein-dependent transport systems inner membrane component  32.89 
 
 
305 aa  152  8.999999999999999e-36  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.290341 
 
 
-
 
NC_013521  Sked_05240  carbohydrate ABC transporter membrane protein  33.99 
 
 
312 aa  151  1e-35  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_0205  binding-protein-dependent transport systems inner membrane component  35.11 
 
 
279 aa  150  2e-35  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.67338  normal  0.16615 
 
 
-
 
NC_013526  Tter_2040  binding-protein-dependent transport systems inner membrane component  34.21 
 
 
305 aa  150  2e-35  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00998336  n/a   
 
 
-
 
NC_014213  Mesil_3392  fumarate reductase/succinate dehydrogenase flavoprotein domain protein  37.07 
 
 
278 aa  149  4e-35  Meiothermus silvanus DSM 9946  Bacteria  normal  0.196448  normal  0.954202 
 
 
-
 
NC_013530  Xcel_2536  binding-protein-dependent transport systems inner membrane component  34.7 
 
 
306 aa  149  7e-35  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.250656  n/a   
 
 
-
 
NC_012034  Athe_2374  binding-protein-dependent transport systems inner membrane component  32.96 
 
 
285 aa  148  8e-35  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_0717  binding-protein-dependent transport systems inner membrane component  34.7 
 
 
279 aa  148  1.0000000000000001e-34  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_01230  ABC-type sugar transport system, permease component  32.65 
 
 
307 aa  148  1.0000000000000001e-34  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0621  binding-protein-dependent transport systems inner membrane component  29.07 
 
 
289 aa  148  1.0000000000000001e-34  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00195134  n/a   
 
 
-
 
NC_013131  Caci_7904  binding-protein-dependent transport systems inner membrane component  35.53 
 
 
271 aa  147  2.0000000000000003e-34  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3791  binding-protein-dependent transport systems inner membrane component  33 
 
 
300 aa  147  2.0000000000000003e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17142  normal 
 
 
-
 
NC_012669  Bcav_3001  binding-protein-dependent transport systems inner membrane component  30.98 
 
 
308 aa  147  3e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_29030  carbohydrate ABC transporter membrane protein  32.71 
 
 
275 aa  147  3e-34  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_3290  binding-protein-dependent transport systems inner membrane component  29.37 
 
 
300 aa  145  5e-34  Enterobacter sp. 638  Bacteria  normal  normal  0.237365 
 
 
-
 
NC_009616  Tmel_1014  binding-protein-dependent transport systems inner membrane component  32.41 
 
 
273 aa  146  5e-34  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5822  putative sugar uptake ABC transporter permease protein  30.2 
 
 
298 aa  145  7.0000000000000006e-34  Streptosporangium roseum DSM 43021  Bacteria  normal  0.546263  normal 
 
 
-
 
NC_012669  Bcav_3574  Monosaccharide-transporting ATPase  36.23 
 
 
290 aa  145  7.0000000000000006e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.156852  normal 
 
 
-
 
NC_010001  Cphy_3031  binding-protein-dependent transport systems inner membrane component  31.23 
 
 
277 aa  145  8.000000000000001e-34  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3148  binding-protein-dependent transport systems inner membrane component  33.23 
 
 
311 aa  145  1e-33  Arthrobacter sp. FB24  Bacteria  decreased coverage  0.00417428  n/a   
 
 
-
 
NC_013235  Namu_0512  binding-protein-dependent transport systems inner membrane component  35.71 
 
 
298 aa  145  1e-33  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0646  binding-protein-dependent transport systems inner membrane component  33.8 
 
 
301 aa  145  1e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_2366  binding-protein-dependent transport systems inner membrane component  36.04 
 
 
288 aa  145  1e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  0.125554  normal 
 
 
-
 
NC_012669  Bcav_0320  binding-protein-dependent transport systems inner membrane component  31.89 
 
 
300 aa  144  2e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_0956  monosaccharide-transporting ATPase  33.57 
 
 
277 aa  144  2e-33  Petrotoga mobilis SJ95  Bacteria  normal  0.0922285  n/a   
 
 
-
 
NC_011886  Achl_3568  binding-protein-dependent transport systems inner membrane component  32.81 
 
 
315 aa  143  3e-33  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_008010  Dgeo_2724  binding-protein-dependent transport systems inner membrane component  32.27 
 
 
290 aa  143  4e-33  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.191447  n/a   
 
 
-
 
NC_013521  Sked_07090  carbohydrate ABC transporter membrane protein  32.79 
 
 
297 aa  143  4e-33  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.484771  normal 
 
 
-
 
NC_013205  Aaci_2458  binding-protein-dependent transport systems inner membrane component  33.8 
 
 
281 aa  143  4e-33  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.162326  n/a   
 
 
-
 
NC_013525  Tter_0124  binding-protein-dependent transport systems inner membrane component  34.94 
 
 
277 aa  142  5e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009708  YpsIP31758_1690  oligogalacturonide ABC tansporter, permease protein  30.8 
 
 
306 aa  142  6e-33  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.064753  n/a   
 
 
-
 
NC_010159  YpAngola_A2646  oligogalacturonide ABC tansporter, permease  30.8 
 
 
306 aa  142  6e-33  Yersinia pestis Angola  Bacteria  normal  0.559892  normal  0.131938 
 
 
-
 
NC_010320  Teth514_2199  monosaccharide-transporting ATPase  34.94 
 
 
269 aa  142  6e-33  Thermoanaerobacter sp. X514  Bacteria  normal  0.139368  n/a   
 
 
-
 
NC_010465  YPK_1800  binding-protein-dependent transport systems inner membrane component  30.8 
 
 
306 aa  142  6e-33  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.429267  n/a   
 
 
-
 
NC_012669  Bcav_2265  binding-protein-dependent transport systems inner membrane component  33.22 
 
 
298 aa  142  9e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.15321  normal 
 
 
-
 
NC_012669  Bcav_0190  binding-protein-dependent transport systems inner membrane component  33.72 
 
 
317 aa  141  9.999999999999999e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.954873  normal 
 
 
-
 
NC_009664  Krad_2231  binding-protein-dependent transport systems inner membrane component  32.44 
 
 
297 aa  141  9.999999999999999e-33  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.807172 
 
 
-
 
NC_009832  Spro_2573  binding-protein-dependent transport systems inner membrane component  32.97 
 
 
272 aa  141  9.999999999999999e-33  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2760  binding-protein-dependent transport systems inner membrane component  33.22 
 
 
290 aa  141  9.999999999999999e-33  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.309927  normal 
 
 
-
 
NC_012669  Bcav_3989  binding-protein-dependent transport systems inner membrane component  34.56 
 
 
324 aa  141  1.9999999999999998e-32  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_0511  binding-protein-dependent transport systems inner membrane component  29.11 
 
 
318 aa  140  3e-32  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.000451963  hitchhiker  0.00127985 
 
 
-
 
NC_012850  Rleg_3428  binding-protein-dependent transport systems inner membrane component  32.87 
 
 
280 aa  140  3e-32  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_009939  Dgeo_3104  ABC transporter, permease component  38.02 
 
 
292 aa  140  3e-32  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_010001  Cphy_0594  binding-protein-dependent transport systems inner membrane component  32.58 
 
 
293 aa  140  3e-32  Clostridium phytofermentans ISDg  Bacteria  decreased coverage  0.0000740706  n/a   
 
 
-
 
NC_006274  BCZK1636  sugar ABC transporter, permease  30.82 
 
 
277 aa  139  3.9999999999999997e-32  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2301  binding-protein-dependent transport systems inner membrane component  35.04 
 
 
285 aa  139  3.9999999999999997e-32  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.866945  n/a   
 
 
-
 
NC_009939  Dgeo_2917  ABC-type sugar transport system, permease component  39.04 
 
 
273 aa  140  3.9999999999999997e-32  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_013205  Aaci_0794  binding-protein-dependent transport systems inner membrane component  34.91 
 
 
273 aa  139  4.999999999999999e-32  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.256296  n/a   
 
 
-
 
NC_013411  GYMC61_2729  binding-protein-dependent transport systems inner membrane component  30.38 
 
 
293 aa  139  4.999999999999999e-32  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013521  Sked_21170  carbohydrate ABC transporter membrane protein  36.47 
 
 
302 aa  139  6e-32  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.281989  normal  0.140209 
 
 
-
 
NC_013526  Tter_2572  binding-protein-dependent transport systems inner membrane component  33.58 
 
 
281 aa  138  8.999999999999999e-32  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_1901  sugar ABC transporter, permease protein  30.82 
 
 
277 aa  138  1e-31  Bacillus cereus ATCC 10987  Bacteria  normal  0.682079  n/a   
 
 
-
 
NC_012669  Bcav_1470  binding-protein-dependent transport systems inner membrane component  32.24 
 
 
305 aa  138  1e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_2048  binding-protein-dependent transport systems inner membrane component  32.48 
 
 
268 aa  137  2e-31  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.353997  n/a   
 
 
-
 
NC_011661  Dtur_1588  binding-protein-dependent transport systems inner membrane component  31.38 
 
 
320 aa  137  2e-31  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_0376  binding-protein-dependent transport systems inner membrane component  34.74 
 
 
278 aa  136  4e-31  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_29400  carbohydrate ABC transporter membrane protein  32.17 
 
 
305 aa  136  5e-31  Brachybacterium faecium DSM 4810  Bacteria  normal  0.709644  n/a   
 
 
-
 
NC_010320  Teth514_1101  binding-protein-dependent transport systems inner membrane component  33.71 
 
 
280 aa  135  6.0000000000000005e-31  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_29880  carbohydrate ABC transporter membrane protein  32.78 
 
 
304 aa  135  7.000000000000001e-31  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_4035  binding-protein-dependent transport systems inner membrane component  31.64 
 
 
275 aa  135  7.000000000000001e-31  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3327  binding-protein-dependent transport systems inner membrane component  32.71 
 
 
314 aa  135  8e-31  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.00328886  n/a   
 
 
-
 
NC_012034  Athe_2079  binding-protein-dependent transport systems inner membrane component  31.9 
 
 
280 aa  135  9e-31  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.697078  n/a   
 
 
-
 
NC_011988  Avi_5582  ABC transporter membrane spanning protein (galacturonic acid)  29.97 
 
 
293 aa  135  9e-31  Agrobacterium vitis S4  Bacteria  normal  0.542291  n/a   
 
 
-
 
NC_012669  Bcav_1657  binding-protein-dependent transport systems inner membrane component  34.23 
 
 
284 aa  135  9e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.354053  normal  0.174244 
 
 
-
 
NC_013131  Caci_6730  binding-protein-dependent transport systems inner membrane component  32.76 
 
 
287 aa  135  9e-31  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0110581  normal 
 
 
-
 
NC_013739  Cwoe_5800  binding-protein-dependent transport systems inner membrane component  32.4 
 
 
275 aa  135  9e-31  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.0752567 
 
 
-
 
NC_012917  PC1_1906  binding-protein-dependent transport systems inner membrane component  29.18 
 
 
301 aa  135  9.999999999999999e-31  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.207694  n/a   
 
 
-
 
NC_013172  Bfae_29340  carbohydrate ABC transporter membrane protein  30.07 
 
 
280 aa  135  9.999999999999999e-31  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
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