| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1800 |
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| Symbol | |
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| ID | 6088267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 2000501 |
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| End bp | 2001421 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641596868 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001720544 |
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| Protein GI | 170024039 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.429267 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGACG TACAACAAAC TTCCAACCAG AAAAAATCAG ATCTGGCTCA GGATATTGCT
GATGCGGAAA TTAGCCGCAC ATTACGCAAA GCTAAAGTCA GTGCTGCTTT CCGCTATATC
GTTTTGATTA TTGTCGGTCT GTTAATGCTT TATCCGCTGT TGTGGATGTT CTCAGCAGCA
TTTAAGCCTA ATAATGAAAT TTTCACTACA TTAGGATTAT GGCCAGAGCA CCCGACAAGT
GATGGTTTCA TTAACGGCTG GAAAACCGGT ACTGAATATA ATTTCGGTCA TTACATGCTG
AACACCTTTA AGTATGTTAT TCCGAAAGTG ATCCTGACCA TTATCTCTTC CACCATTGTC
GCTTATGGCT TTGCGCGCTT TGAGATCCCT TGGAAGAAAT TCTGGTTTAC CACCTTGATC
ACCACCATGT TGCTGCCAAG TACCGTGTTG TTGATCCCGC AATACATCAT GTTCCGTGAA
ATGGGCATGC TGAATAGCTA CTTACCGCTC TATCTGCCGC TGGCCTTCGC CACACAAGGG
TTCTTCGTTT TCATGCTGAT CCAGTTCTTG CGCGGTGTCC CGCGTGATAT GGAAGAAGCA
GCACAAATTG ACGGCTGTAA CTCTTTCCAG GTGTTGTGGT ATGTGGTAGT GCCAATTTTA
AAACCGGCCA TTATCTCTGT CGCCCTGTTC CAGTTCATGT GGTCAATGAA CGACTTTATC
GGCCCACTGA TTTATGTCTA TAGCGTAGAT AAGTACCCGA TAGCGCTAGC TCTGAAGATG
TCAATTGACG TTACCGAAGG CGCACCGTGG AACGAAATTC TGGCAATGGC AAGCATCTCC
ATTCTGCCGT CCATCATTGT TTTCTTCCTG GCTCAACGCT ACTTCGTGCA AGGCGTAACC
AGCAGCGGAA TTAAAGGTTA A
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| Protein sequence | MTDVQQTSNQ KKSDLAQDIA DAEISRTLRK AKVSAAFRYI VLIIVGLLML YPLLWMFSAA
FKPNNEIFTT LGLWPEHPTS DGFINGWKTG TEYNFGHYML NTFKYVIPKV ILTIISSTIV
AYGFARFEIP WKKFWFTTLI TTMLLPSTVL LIPQYIMFRE MGMLNSYLPL YLPLAFATQG
FFVFMLIQFL RGVPRDMEEA AQIDGCNSFQ VLWYVVVPIL KPAIISVALF QFMWSMNDFI
GPLIYVYSVD KYPIALALKM SIDVTEGAPW NEILAMASIS ILPSIIVFFL AQRYFVQGVT
SSGIKG
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