Gene Cphy_3031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3031 
Symbol 
ID5743357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp3703869 
End bp3704702 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content34% 
IMG OID641294132 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001560127 
Protein GI160881159 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAAAA AAAATAAAGG TTTAAAAATA TTTCTAACGA TATTCATACT GAGTATTGGA 
TTAATAGCCA ACTTTCCATT TATATTCATG ATTTCTTCTT CTTTTAAAGT AAGCGGAGAA
GTTATGAAAT TCCCTTGGAA ATTGATTTCA GAAAATCCGA CACTCATGAA CTTTAAAGCA
TTATTTACAA ATGGTATCTA CAACTTCCAG AAATGGTATT TAAATACCAT TGTTATGACT
GGTCTTACAA TCTTAATTAA AATTTTCTTT GTAAGCTTTA CTGCATATGG CTTTGCTAAG
ATTAAATTTA AGGGAAAGGA TTTTATATTC CTTATCTTAT TGTCAGCTAT GATGATACCA
AGCGATATTA TGATTATACC AAGATACATG ATATTTAAGA ATTTGCACAT TCTTGACTCT
ATGTGGGCAT TAATTTTGCC AAGTTGTGTG GATGTTTATT TTGTGTTTTT ACTACGTCAG
TCATTTATTT CAATCCCGGA TTCCATAAGT GAAGCGGCGA AAATTGACGG TTGTGACCAC
TTCCGTATTT ATTGGAGAAT TATTTTCCCA CTGGCAAAAC CGGCAATTGC AACTATGGCG
CTGTTTTCTT TCACATGGTC TTGGAATGAT TACATGGGTC CATATCTGTA TATTTCTACT
ATGGATAAGC AGATGTTATC AGTTGGAGTT AAATTATTCT CCTCTGGTAT GATTCAGGAT
TATGGTACTC AGATGGCTGC TGCAACAGTG GTACTTTTAC CAATTCTAAT TGCATTCCTT
TTCTGCCAGA AGTTCTTCAT CGAAGGTGTC GCTTCTTCTG CAGTAAAAGG GTGA
 
Protein sequence
MQKKNKGLKI FLTIFILSIG LIANFPFIFM ISSSFKVSGE VMKFPWKLIS ENPTLMNFKA 
LFTNGIYNFQ KWYLNTIVMT GLTILIKIFF VSFTAYGFAK IKFKGKDFIF LILLSAMMIP
SDIMIIPRYM IFKNLHILDS MWALILPSCV DVYFVFLLRQ SFISIPDSIS EAAKIDGCDH
FRIYWRIIFP LAKPAIATMA LFSFTWSWND YMGPYLYIST MDKQMLSVGV KLFSSGMIQD
YGTQMAAATV VLLPILIAFL FCQKFFIEGV ASSAVKG