| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1906 |
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| Symbol | |
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| ID | 8132849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2199786 |
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| End bp | 2200691 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644865195 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003017483 |
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| Protein GI | 253688293 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.207694 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTGACA TGCATTCAAA CCTGACTACA GCACAAGAAA TTGCTGCTGC AGAAGTACGC
CGCACGCTGC GTAAAGAAAA AATCAGTGCC GTTATCCGTT ACGTGATACT GCTGTTCGTT
GGTTTACTGA TGCTTTACCC ACTGGCGTGG ATGTTCTCAG CCTCGTTCAA ACCGAACCAT
GAGATCTTCA CGACACTAGG CCTGTGGCCA GAACACGCCA CCTGGGACGG TTTCGTTAAC
GGTTGGAAAA CCGGTACGGA ATACAATTTC GGTCACTACA TGATTAACAC TTTCCAGTAC
GTAATTCCGA AAGTGGTTCT GACCGTTATT TCCTCGGTGA TTGTGGCTTA TGGCTTCGCT
CGCTTTGATA TTCCGTGGAA GGGCTTCTGG TTCGCGACAC TGATCACCAC CATGCTGTTG
CCAAGCACCG TACTGTTGAT TCCGCAGTAC CTCATGTTCC GCGAAATGGG CATGCTGAAC
AGCTATCTGC CACTGTACTT ACCGCTGGCG TTTGCAACAC AAGGGTTCTT TGTGTTCATG
CTGATCCAGT TCCTGCGTGG TGTACCACGT GATATGGAAG AAGCCGCTCA GATCGATGGC
TGTAACTCCT TCCAGGTTCT GTGGTATGTG GTCGTGCCGA TTTTGAAACC AGCCATCATC
TCTGTTGCGC TGTTCCAGTT CATGTGGTCA ATGAACGACT TCATCGGTCC GCTGATTTAT
GTTTATAGCG TGGATAAATA TCCGATTGCG CTGGCGCTGA AAATGTCTAT CGACGTTACT
GAAGGCGCTC CGTGGAATGA AATTCTGGCC ATGTCCAGCA TCTCCATTCT GCCATCCATC
ATTGTTTTCT TCCTGGCACA GCGCTACTTC GTACAAGGCG TGACCAGCAG CGGAATTAAA
GGTTAA
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| Protein sequence | MADMHSNLTT AQEIAAAEVR RTLRKEKISA VIRYVILLFV GLLMLYPLAW MFSASFKPNH
EIFTTLGLWP EHATWDGFVN GWKTGTEYNF GHYMINTFQY VIPKVVLTVI SSVIVAYGFA
RFDIPWKGFW FATLITTMLL PSTVLLIPQY LMFREMGMLN SYLPLYLPLA FATQGFFVFM
LIQFLRGVPR DMEEAAQIDG CNSFQVLWYV VVPILKPAII SVALFQFMWS MNDFIGPLIY
VYSVDKYPIA LALKMSIDVT EGAPWNEILA MSSISILPSI IVFFLAQRYF VQGVTSSGIK
G
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