| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3565 |
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| Symbol | |
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| ID | 5541066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4654798 |
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| End bp | 4655673 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640895684 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001433632 |
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| Protein GI | 156743503 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.276199 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGTGC GGAGCGCTGC TCTGCTCTTC TGGCGGACCC GTCGCGGTCA GGCGCGTCTG
ACATCGCTGA CGACGCTTCT CATCCTGCTG GCAGGGTCCA CATTGGTGCT GATTCCCTTC
TTCTGGATGA TCTCGACATC ACTGAAGCAG GCGAGTCAGG TGTACCTCTC GCCGCCGATC
TGGCTCCCTG ACCCGCCGCA GTGGGAGAAC TACGTGCAGG CGGTGACGCG CGTGCCGTTT
CATCTGTACG CATGGAACAC AGCCATCATT GTTGGATTGG TGACGATTGG CACGCTTCTT
TCGTGTTCGC TCAGCGCCTA CGGATTTGCG CGCCTGTCGG CGCCGGGCAA GAACGTCATC
TTCATGCTGT TGCTCTCGAC GCTGATGTTG CCCAGCGCCG TAACACTCGT GCCAACTTAC
CTGCTGTTTA ATGCGCTGGG ATGGGTGGGA TCGTTTCTGC CGCTTATCGT GCCCGCCTAC
TTCGGCAGCG CGTTTTTTAT CTTCCTGCTG CGGCAGTTCT ACCTGACGAT CCCGCGTGAA
CTCGAAGAGG CTGCGACGAT TGACGGCGCC AATGTCTACC AGATTTGGTG GAGCATCATG
ATGCCGCTCA GTTATCCCGT GCTGGCGACG GTGGTGGTCT TTACGTTTGT GGGCACGTAC
AACGACTTTT TCACGCCGTT GATCTACCTG ACCGATGAGA GCAAACGCAC CATTGCAGTC
GCGCTCTCCT ATTTCCAGGG TTCGCCGCGT ATCGGGCCGC AGATGCACCT GCTGATGGCA
GCGGTGACGA TTTCGATCGT GCCGCCGCTC ATTCTGTTCA TTCTGGCGCA ACGATATTTC
GTGCGCGGAA TCGTGATGAC CGGGATTAAG GGGTAG
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| Protein sequence | MSVRSAALLF WRTRRGQARL TSLTTLLILL AGSTLVLIPF FWMISTSLKQ ASQVYLSPPI
WLPDPPQWEN YVQAVTRVPF HLYAWNTAII VGLVTIGTLL SCSLSAYGFA RLSAPGKNVI
FMLLLSTLML PSAVTLVPTY LLFNALGWVG SFLPLIVPAY FGSAFFIFLL RQFYLTIPRE
LEEAATIDGA NVYQIWWSIM MPLSYPVLAT VVVFTFVGTY NDFFTPLIYL TDESKRTIAV
ALSYFQGSPR IGPQMHLLMA AVTISIVPPL ILFILAQRYF VRGIVMTGIK G
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