Gene Aaci_0794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0794 
Symbol 
ID8424287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp865947 
End bp866768 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content45% 
IMG OID645026910 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003184226 
Protein GI258510792 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.256296 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGCGAA TTCTTACGAT TCTTGCTGCT TACTTCGTCC TCGCTGTAGG TGCATTCATA 
TCCATATTTC CGTATCTGTG GGCCGTACTT ACTTCTTTGA AGCCTGAAAG CGAGGTCTTC
ACATCTCACT TTTTGAGTCT GCCGACTCAC ATCGAATGGG CCAACTATAC CCATGTATTT
CAACAGATTA ACATGGGGCG ATACTTACTG AACACCGTGA TTGTGGCAGT TGCGAGCGTG
CTAGGCCAGC TCATTTTCGG TTCTATGGCT GCCTATGGAT TTTCGCGGTT TAACTTTAAG
GGGAAGAATG TAATATTCAT GCTTTATTTA AGTACGCTCA TGATCCCCAA CATCGTAACA
CTCATTCCTC TATTTATCAT GATGAAATAT CTGGGGTGGA TCAACACCTA CTATGCACTC
ATTGCGCCAG CTGCGCTCGG GACTCCGGTG GGCATATTTC TGTTGAGACA ATTTTTCCTA
ACTATTCCCT CTGAGATTGA AGAAGCCGCT CGAATGGACG GAGCAGGTGT CATTCGAGTA
TTCGTACAAA TCATCTTGCC TTTAAGCAAA CCGGTTCTAG CGACTTTGGC AATCATTACG
TTCGTGTCGT CATGGAACAA CTTTCTATGG CCCCTCATTG TGACGAATAC CGACTCTATG
AAGCTTGTGA GTGTAGGCAT TGCCTCGTTT CAATTTCAAG TAGGTGCAGA ATGGAACTAC
ATGATGGCTG CTTCCACAAT AGCCCTGCTC CCATTGGTCA TCCTATTCTT GCTGTTTCAG
CGCAGGATTA TCGAGTCAAT TCAGCTCACT GGGTTGAAGT AG
 
Protein sequence
MRRILTILAA YFVLAVGAFI SIFPYLWAVL TSLKPESEVF TSHFLSLPTH IEWANYTHVF 
QQINMGRYLL NTVIVAVASV LGQLIFGSMA AYGFSRFNFK GKNVIFMLYL STLMIPNIVT
LIPLFIMMKY LGWINTYYAL IAPAALGTPV GIFLLRQFFL TIPSEIEEAA RMDGAGVIRV
FVQIILPLSK PVLATLAIIT FVSSWNNFLW PLIVTNTDSM KLVSVGIASF QFQVGAEWNY
MMAASTIALL PLVILFLLFQ RRIIESIQLT GLK