Gene Aaci_2458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_2458 
Symbol 
ID8425987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp2525498 
End bp2526343 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content58% 
IMG OID645028576 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003185853 
Protein GI258512419 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.162326 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGGAA CCATCCGCAC GCGGCGCGGA ATCGTCCTCG CGCACGCCGT GCTCGTGATC 
ATCGGATTCT TTCTCATCTA TCCCGTTCTC TGGATGGTGT TTGGCTCATT CAAGCCGACC
AACGAGATCT TCTCCAGCGC CTCGTTTTGG CCCAAGCACT GGACGTTCGC GAATTATCCG
CAAGGTTGGA ATGCGATTCC TGGCCTTCCG TTTGGGACGT TCATCCTGCA TTCGCTGTCG
GTGTCATGTC TGGTGTCTGT CGGCACGGTC ATCTCGTCCG CGATTGTCGC GTTCGGGTTC
GCGCGTTTCA CGTTCCGAGG CAAATCCATT CTGTTTGGCA TCATGATGAT CACGATGATG
CTGCCGACGC AGGTCACGCT CATTCCCCAG TACGCGATGT TTCACGATCT GGGCTGGATC
AATACCTACT ATCCGCTCAT TGTGCCCGCG TTCTTTGGCA GCCCGTTTTT CATCTTTCTC
ATCGTTCAAT TCATCCGGGG GTTGCCCAAA GAATTGGACG AGGCCGCGAA GATCGACGGC
TGCAACGCCT TCACGCTGTT TGTGCGCGTC ATCCTGCCGC TCATCGTGCC GGCGCTCATC
ACCACGGCCA TCTTCAGCTT CATCTGGTGC TGGGATGACT TCTTCTCTCA GTTGATTTAC
CTTAATTCCG CGCAGAAGTT CACCGTGCCG CTCGGGCTGG AGTCGCTCGC GAACGCCGTC
GCGCAGGAGG AGTGGGGGCC GCTCTTCGCC ATGTCCACCG TGTCGCTCAT TCCGCTCTTC
CTCATCTTCT TCTTCCTTCA GAAGTACGTC GTCCGCGGCA TCGCCACCAC GGGCCTGCGC
GGCTGA
 
Protein sequence
MTGTIRTRRG IVLAHAVLVI IGFFLIYPVL WMVFGSFKPT NEIFSSASFW PKHWTFANYP 
QGWNAIPGLP FGTFILHSLS VSCLVSVGTV ISSAIVAFGF ARFTFRGKSI LFGIMMITMM
LPTQVTLIPQ YAMFHDLGWI NTYYPLIVPA FFGSPFFIFL IVQFIRGLPK ELDEAAKIDG
CNAFTLFVRV ILPLIVPALI TTAIFSFIWC WDDFFSQLIY LNSAQKFTVP LGLESLANAV
AQEEWGPLFA MSTVSLIPLF LIFFFLQKYV VRGIATTGLR G