More than 300 homologs were found in PanDaTox collection
for query gene Dred_2891 on replicon NC_009253
Organism: Desulfotomaculum reducens MI-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009253  Dred_2891  response regulator receiver protein  100 
 
 
135 aa  280  6.000000000000001e-75  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00486665  n/a   
 
 
-
 
NC_013216  Dtox_3740  response regulator receiver protein  62.3 
 
 
135 aa  160  5.0000000000000005e-39  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.119956  normal 
 
 
-
 
NC_008554  Sfum_2092  two component, sigma54 specific, Fis family transcriptional regulator  39.47 
 
 
462 aa  98.6  3e-20  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.131918 
 
 
-
 
NC_012793  GWCH70_3334  response regulator receiver protein  38.89 
 
 
120 aa  96.3  1e-19  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_1013  two component, sigma54 specific, transcriptional regulator, Fis family  41.82 
 
 
456 aa  95.9  2e-19  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.0616674 
 
 
-
 
NC_011830  Dhaf_4841  response regulator receiver protein  43.24 
 
 
118 aa  95.1  3e-19  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.202718  n/a   
 
 
-
 
NC_008789  Hhal_1215  nitrogen metabolism transcriptional regulator, NtrC, Fis family  37.29 
 
 
471 aa  94  6e-19  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_2412  response regulator receiver protein  43.69 
 
 
123 aa  93.6  7e-19  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.18168  n/a   
 
 
-
 
NC_013205  Aaci_2784  response regulator receiver protein  40.74 
 
 
125 aa  93.2  1e-18  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.0945133  n/a   
 
 
-
 
NC_009943  Dole_2807  two component, sigma54 specific, Fis family transcriptional regulator  39.82 
 
 
466 aa  93.2  1e-18  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.75933  n/a   
 
 
-
 
NC_002939  GSU0008  sensory box histidine kinase/response regulator  39.64 
 
 
516 aa  92  2e-18  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5134  response regulator receiver protein  39.81 
 
 
122 aa  92  2e-18  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0135031  n/a   
 
 
-
 
NC_009674  Bcer98_3857  response regulator receiver protein  39.81 
 
 
122 aa  92.8  2e-18  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.161717  n/a   
 
 
-
 
NC_011658  BCAH187_A5514  sporulation initiation phosphotransferase F  39.81 
 
 
122 aa  92  3e-18  Bacillus cereus AH187  Bacteria  hitchhiker  0.000000170867  n/a   
 
 
-
 
NC_003909  BCE_5466  stage 0 sporulation protein F  39.81 
 
 
122 aa  92  3e-18  Bacillus cereus ATCC 10987  Bacteria  normal  0.0750811  n/a   
 
 
-
 
NC_005945  BAS5185  stage 0 sporulation protein F  39.81 
 
 
122 aa  92  3e-18  Bacillus anthracis str. Sterne  Bacteria  normal  0.0413406  n/a   
 
 
-
 
NC_005957  BT9727_5020  stage 0 sporulation protein F  39.81 
 
 
122 aa  92  3e-18  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.000000180816  n/a   
 
 
-
 
NC_006274  BCZK5036  stage 0 sporulation protein F  39.81 
 
 
122 aa  92  3e-18  Bacillus cereus E33L  Bacteria  hitchhiker  0.00000000486089  n/a   
 
 
-
 
NC_011773  BCAH820_5429  sporulation initiation phosphotransferase F  39.81 
 
 
122 aa  92  3e-18  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  6.26925e-31 
 
 
-
 
NC_007530  GBAA_5581  stage 0 sporulation protein F  39.81 
 
 
122 aa  92  3e-18  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0132264  n/a   
 
 
-
 
NC_011725  BCB4264_A5459  sporulation initiation phosphotransferase F  39.81 
 
 
122 aa  92  3e-18  Bacillus cereus B4264  Bacteria  hitchhiker  0.000856307  n/a   
 
 
-
 
NC_013411  GYMC61_3444  response regulator receiver protein  38.32 
 
 
120 aa  91.7  3e-18  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011891  A2cp1_0673  two component, sigma54 specific, transcriptional regulator, Fis family  41.12 
 
 
458 aa  90.9  6e-18  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_0673  two component, sigma54 specific, transcriptional regulator, Fis family  41.12 
 
 
457 aa  90.5  7e-18  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_0639  two component, sigma54 specific, Fis family transcriptional regulator  41.12 
 
 
455 aa  90.5  7e-18  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0495  two component, sigma-54 specific, Fis family transcriptional regulator  39.62 
 
 
456 aa  90.5  7e-18  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0010  PAS/PAC sensor hybrid histidine kinase  39.64 
 
 
508 aa  90.1  9e-18  Geobacter metallireducens GS-15  Bacteria  normal  0.0502065  normal 
 
 
-
 
NC_012918  GM21_0009  multi-sensor signal transduction histidine kinase  42.45 
 
 
509 aa  89.4  1e-17  Geobacter sp. M21  Bacteria  n/a    normal  0.923259 
 
 
-
 
NC_010424  Daud_2177  response regulator receiver protein  39.09 
 
 
120 aa  89.4  1e-17  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_2392  two component, sigma54 specific, transcriptional regulator, Fis family  39.82 
 
 
458 aa  89.4  1e-17  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0321511  normal 
 
 
-
 
NC_002939  GSU2915  sigma-54 dependent DNA-binding response regulator  41.51 
 
 
457 aa  89  2e-17  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_0010  multi-sensor signal transduction histidine kinase  42.45 
 
 
511 aa  88.6  2e-17  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_4098  nitrogen regulation protein NR(I)  37.7 
 
 
470 aa  89  2e-17  Enterobacter sp. 638  Bacteria  normal  normal  0.797915 
 
 
-
 
NC_011772  BCG9842_B5493  sporulation initiation phosphotransferase F  38.89 
 
 
122 aa  88.6  2e-17  Bacillus cereus G9842  Bacteria  hitchhiker  0.0000162821  unclonable  2.17721e-26 
 
 
-
 
CP001509  ECD_03753  fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein  36.89 
 
 
469 aa  88.2  3e-17  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_4118  nitrogen metabolism transcriptional regulator, NtrC, Fis Family  36.89 
 
 
469 aa  88.2  3e-17  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0790  two component, sigma54 specific, transcriptional regulator, Fis family  36.89 
 
 
466 aa  88.6  3e-17  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010498  EcSMS35_4253  nitrogen regulation protein NR(I)  36.89 
 
 
472 aa  88.2  3e-17  Escherichia coli SMS-3-5  Bacteria  normal  0.177692  normal  0.167125 
 
 
-
 
NC_010658  SbBS512_E4344  nitrogen regulation protein NR(I)  36.89 
 
 
469 aa  88.2  3e-17  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A4095  nitrogen regulation protein NR(I)  36.89 
 
 
469 aa  88.2  3e-17  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_5314  nitrogen regulation protein NR(I)  36.89 
 
 
472 aa  88.2  3e-17  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.111299  normal  0.738695 
 
 
-
 
NC_009675  Anae109_4152  two component, sigma54 specific, Fis family transcriptional regulator  36.79 
 
 
480 aa  88.6  3e-17  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.038607 
 
 
-
 
NC_009801  EcE24377A_4390  nitrogen regulation protein NR(I)  36.89 
 
 
469 aa  88.2  3e-17  Escherichia coli E24377A  Bacteria  normal  0.127215  n/a   
 
 
-
 
NC_012892  B21_03702  hypothetical protein  36.89 
 
 
469 aa  88.2  3e-17  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_4148  nitrogen regulation protein NR(I)  36.89 
 
 
469 aa  88.2  3e-17  Escherichia coli ATCC 8739  Bacteria  normal  normal  0.221467 
 
 
-
 
NC_010814  Glov_3076  two component, sigma54 specific, transcriptional regulator, Fis family  36.79 
 
 
454 aa  88.2  4e-17  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_0499  response regulator receiver domain-containing protein  40.95 
 
 
473 aa  87.4  5e-17  Saccharophagus degradans 2-40  Bacteria  normal  0.021061  normal 
 
 
-
 
NC_007760  Adeh_0417  two component, sigma54 specific, Fis family transcriptional regulator  35.85 
 
 
474 aa  87.4  6e-17  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.45134  n/a   
 
 
-
 
NC_011145  AnaeK_0445  two component, sigma54 specific, transcriptional regulator, Fis family  35.85 
 
 
481 aa  87.4  7e-17  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1385  acetoacetate metabolism regulatory protein AtoC  40 
 
 
460 aa  87.4  7e-17  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_4159  nitrogen regulation protein NR(I)  37.7 
 
 
470 aa  87  8e-17  Dickeya zeae Ech1591  Bacteria  normal  0.086406  n/a   
 
 
-
 
NC_013385  Adeg_0532  two component, sigma54 specific, transcriptional regulator, Fis family  39.13 
 
 
470 aa  87  8e-17  Ammonifex degensii KC4  Bacteria  hitchhiker  0.00706375  n/a   
 
 
-
 
NC_009253  Dred_1312  two component, sigma54 specific, Fis family transcriptional regulator  40.91 
 
 
455 aa  86.7  9e-17  Desulfotomaculum reducens MI-1  Bacteria  normal  0.502008  n/a   
 
 
-
 
NC_012880  Dd703_3962  nitrogen regulation protein NR(I)  37.7 
 
 
470 aa  87  9e-17  Dickeya dadantii Ech703  Bacteria  normal  0.389706  n/a   
 
 
-
 
NC_010814  Glov_1377  two component, sigma54 specific, transcriptional regulator, Fis family  36.79 
 
 
462 aa  86.7  1e-16  Geobacter lovleyi SZ  Bacteria  normal  0.244526  n/a   
 
 
-
 
NC_011891  A2cp1_0446  two component, sigma54 specific, transcriptional regulator, Fis family  35.85 
 
 
481 aa  86.7  1e-16  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0555  two component, sigma54 specific, Fis family transcriptional regulator  40.57 
 
 
457 aa  86.7  1e-16  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_2158  two component, sigma54 specific, transcriptional regulator, Fis family  41.51 
 
 
453 aa  86.7  1e-16  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_2369  acetoacetate metabolism regulatory protein AtoC  36.72 
 
 
461 aa  86.3  1e-16  Escherichia coli SMS-3-5  Bacteria  normal  0.0790211  normal 
 
 
-
 
CP001509  ECD_02147  fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein  38.39 
 
 
461 aa  85.9  2e-16  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_1438  two component, sigma54 specific, transcriptional regulator, Fis family  38.39 
 
 
461 aa  85.9  2e-16  Escherichia coli DH1  Bacteria  normal  0.445705  n/a   
 
 
-
 
NC_002939  GSU1320  sigma-54 dependent DNA-binding response regulator  37.6 
 
 
460 aa  85.9  2e-16  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_1430  acetoacetate metabolism regulatory protein AtoC  38.39 
 
 
461 aa  85.9  2e-16  Escherichia coli ATCC 8739  Bacteria  normal  0.324678  hitchhiker  0.00137179 
 
 
-
 
NC_010159  YpAngola_A0027  nitrogen regulation protein NR(I)  36.89 
 
 
470 aa  85.5  2e-16  Yersinia pestis Angola  Bacteria  normal  0.307133  normal 
 
 
-
 
NC_011205  SeD_A4394  nitrogen regulation protein NR(I)  36.89 
 
 
469 aa  85.9  2e-16  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A4216  nitrogen regulation protein NR(I)  36.89 
 
 
469 aa  85.9  2e-16  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.295301  normal 
 
 
-
 
NC_007517  Gmet_1397  two component, sigma54 specific, Fis family transcriptional regulator  39.09 
 
 
458 aa  85.5  2e-16  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A2361  acetoacetate metabolism regulatory protein AtoC  38.39 
 
 
461 aa  85.9  2e-16  Escherichia coli HS  Bacteria  normal  0.18992  n/a   
 
 
-
 
NC_009832  Spro_4883  nitrogen regulation protein NR(I)  36.43 
 
 
470 aa  85.9  2e-16  Serratia proteamaculans 568  Bacteria  normal  0.177074  hitchhiker  0.0000322182 
 
 
-
 
NC_009253  Dred_2001  two component, sigma54 specific, Fis family transcriptional regulator  37.27 
 
 
454 aa  85.5  2e-16  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B4237  nitrogen regulation protein NR(I)  36.89 
 
 
469 aa  85.9  2e-16  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_0827  acetoacetate metabolism regulatory protein AtoC  38.74 
 
 
460 aa  85.5  2e-16  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.158461 
 
 
-
 
NC_008009  Acid345_3269  two component, sigma54 specific, Fis family transcriptional regulator  37.5 
 
 
467 aa  85.5  2e-16  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.382263 
 
 
-
 
NC_008554  Sfum_2806  two component, sigma54 specific, Fis family transcriptional regulator  41.07 
 
 
450 aa  85.9  2e-16  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_4191  nitrogen regulation protein NR(I)  36.89 
 
 
470 aa  85.5  2e-16  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.500264  n/a   
 
 
-
 
NC_011080  SNSL254_A4287  nitrogen regulation protein NR(I)  36.89 
 
 
469 aa  85.9  2e-16  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.0756679  normal 
 
 
-
 
NC_011083  SeHA_C4333  nitrogen regulation protein NR(I)  36.89 
 
 
469 aa  85.9  2e-16  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.140715  normal 
 
 
-
 
NC_009708  YpsIP31758_0025  nitrogen regulation protein NR(I)  36.89 
 
 
470 aa  85.5  2e-16  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.151443  n/a   
 
 
-
 
NC_012892  B21_02106  hypothetical protein  38.39 
 
 
461 aa  85.9  2e-16  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0017  two component, sigma54 specific, Fis family transcriptional regulator  40.35 
 
 
459 aa  85.9  2e-16  Desulfovibrio vulgaris DP4  Bacteria  normal  0.120309  normal 
 
 
-
 
NC_008609  Ppro_1655  two component, sigma54 specific, Fis family transcriptional regulator  40.91 
 
 
462 aa  85.1  3e-16  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.000025661  n/a   
 
 
-
 
NC_002939  GSU1495  sigma-54 dependent DNA-binding response regulator  38.74 
 
 
458 aa  84.3  4e-16  Geobacter sulfurreducens PCA  Bacteria  normal  0.301103  n/a   
 
 
-
 
NC_009943  Dole_0427  two component, sigma54 specific, Fis family transcriptional regulator  42.06 
 
 
458 aa  84.3  5e-16  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_0684  two component, sigma54 specific, Fis family transcriptional regulator  38.68 
 
 
456 aa  84.3  5e-16  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_010424  Daud_0677  response regulator receiver modulated metal dependent phosphohydrolase  40.2 
 
 
343 aa  84  6e-16  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.756866  n/a   
 
 
-
 
NC_013552  DhcVS_1078  DNA-binding response regulator  36.52 
 
 
180 aa  84  6e-16  Dehalococcoides sp. VS  Bacteria  unclonable  0.00000000000063084  n/a   
 
 
-
 
NC_012918  GM21_2682  two component, sigma54 specific, transcriptional regulator, Fis family  34.48 
 
 
456 aa  84  7e-16  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000000048168 
 
 
-
 
NC_007517  Gmet_2453  two component, sigma54 specific, Fis family transcriptional regulator  37.5 
 
 
461 aa  83.6  8e-16  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000196128  normal 
 
 
-
 
NC_012918  GM21_3098  two component, sigma54 specific, transcriptional regulator, Fis family  35.45 
 
 
491 aa  83.6  8e-16  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009656  PSPA7_5859  two-component response regulator NtrC  35.34 
 
 
476 aa  83.6  8e-16  Pseudomonas aeruginosa PA7  Bacteria  normal  0.421071  n/a   
 
 
-
 
NC_011769  DvMF_1993  two component, sigma54 specific, transcriptional regulator, Fis family  40.91 
 
 
486 aa  83.6  9e-16  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009439  Pmen_4144  nitrogen metabolism transcriptional regulator, NtrC, Fis family  33.33 
 
 
477 aa  83.6  9e-16  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_1954  two component, sigma54 specific, transcriptional regulator, Fis family  35.9 
 
 
464 aa  83.6  9e-16  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.611403  n/a   
 
 
-
 
NC_008463  PA14_67680  two-component response regulator NtrC  35.34 
 
 
476 aa  83.6  9e-16  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.000437551  normal 
 
 
-
 
NC_011146  Gbem_1534  two component, sigma54 specific, transcriptional regulator, Fis family  34.48 
 
 
456 aa  83.6  9e-16  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_3413  two component, sigma54 specific, transcriptional regulator, Fis family  36.45 
 
 
453 aa  82.8  0.000000000000001  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2396  response regulator receiver protein  34.45 
 
 
126 aa  83.2  0.000000000000001  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.612966  normal  0.464694 
 
 
-
 
NC_012918  GM21_3475  two component, sigma54 specific, transcriptional regulator, Fis family  36.45 
 
 
453 aa  82.8  0.000000000000001  Geobacter sp. M21  Bacteria  n/a    normal  0.0804749 
 
 
-
 
NC_009943  Dole_1777  two component, sigma54 specific, Fis family transcriptional regulator  38.32 
 
 
465 aa  82.8  0.000000000000001  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1869  two component, sigma54 specific, transcriptional regulator, Fis family  35.9 
 
 
464 aa  83.2  0.000000000000001  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
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