More than 300 homologs were found in PanDaTox collection
for query gene Krad_1114 on replicon NC_009664
Organism: Kineococcus radiotolerans SRS30216



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009664  Krad_1114  binding-protein-dependent transport systems inner membrane component  100 
 
 
319 aa  637    Kineococcus radiotolerans SRS30216  Bacteria  normal  0.32149  normal  0.356013 
 
 
-
 
NC_013757  Gobs_3933  binding-protein-dependent transport systems inner membrane component  68.32 
 
 
320 aa  429  1e-119  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.292649  n/a   
 
 
-
 
NC_012669  Bcav_1096  binding-protein-dependent transport systems inner membrane component  68.38 
 
 
315 aa  401  1e-111  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.175054  normal 
 
 
-
 
NC_009338  Mflv_3852  binding-protein-dependent transport systems inner membrane component  59.34 
 
 
310 aa  362  3e-99  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.0634568 
 
 
-
 
NC_014151  Cfla_0961  binding-protein-dependent transport systems inner membrane component  65.02 
 
 
320 aa  362  4e-99  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.158412  hitchhiker  0.000108715 
 
 
-
 
NC_008726  Mvan_2543  binding-protein-dependent transport systems inner membrane component  59.34 
 
 
310 aa  360  2e-98  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.944367  normal 
 
 
-
 
NC_012803  Mlut_04590  permease component of ABC-type sugar transporter  60.88 
 
 
323 aa  358  5e-98  Micrococcus luteus NCTC 2665  Bacteria  normal  0.359187  n/a   
 
 
-
 
NC_013169  Ksed_20480  carbohydrate ABC transporter membrane protein  57.05 
 
 
318 aa  349  4e-95  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.0521728  normal  0.389193 
 
 
-
 
NC_007484  Noc_0281  ABC transporter, inner membrane subunit  53.06 
 
 
292 aa  293  3e-78  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_06500  carbohydrate ABC transporter membrane protein  47.02 
 
 
321 aa  270  2e-71  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_1867  binding-protein-dependent transport systems inner membrane component  47.12 
 
 
388 aa  269  5e-71  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4645  binding-protein-dependent transport systems inner membrane component  48.58 
 
 
299 aa  266  4e-70  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  hitchhiker  0.00190071 
 
 
-
 
NC_008146  Mmcs_3982  binding-protein-dependent transport systems inner membrane component  50 
 
 
308 aa  264  2e-69  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4056  binding-protein-dependent transport systems inner membrane component  50 
 
 
308 aa  264  2e-69  Mycobacterium sp. KMS  Bacteria  normal  0.853442  normal  0.685254 
 
 
-
 
NC_009077  Mjls_3996  binding-protein-dependent transport systems inner membrane component  50 
 
 
308 aa  263  3e-69  Mycobacterium sp. JLS  Bacteria  normal  0.172958  normal  0.378531 
 
 
-
 
NC_014158  Tpau_1200  binding-protein-dependent transport systems inner membrane component  47 
 
 
310 aa  263  4e-69  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_4616  binding-protein-dependent transport systems inner membrane component  50.89 
 
 
331 aa  261  8.999999999999999e-69  Frankia sp. EAN1pec  Bacteria  normal  0.338244  normal 
 
 
-
 
NC_009565  TBFG_11261  sugar-transport integral membrane protein ABC transporter sugA  50.9 
 
 
307 aa  254  1.0000000000000001e-66  Mycobacterium tuberculosis F11  Bacteria  normal  hitchhiker  0.00812399 
 
 
-
 
NC_013093  Amir_0808  binding-protein-dependent transport systems inner membrane component  46.25 
 
 
318 aa  253  3e-66  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_1042  binding-protein-dependent transport systems inner membrane component  45.1 
 
 
292 aa  230  2e-59  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0233696  normal  0.724909 
 
 
-
 
NC_010320  Teth514_0396  binding-protein-dependent transport systems inner membrane component  41.11 
 
 
307 aa  211  1e-53  Thermoanaerobacter sp. X514  Bacteria  normal  0.701562  n/a   
 
 
-
 
NC_008541  Arth_3686  binding-protein-dependent transport systems inner membrane component  38.83 
 
 
310 aa  209  4e-53  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_3811  binding-protein-dependent transport systems inner membrane component  36.79 
 
 
328 aa  202  8e-51  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_2525  binding-protein-dependent transport systems inner membrane component  37.76 
 
 
330 aa  201  1.9999999999999998e-50  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_009668  Oant_2941  binding-protein-dependent transport systems inner membrane component  36.39 
 
 
320 aa  197  2.0000000000000003e-49  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.974377  n/a   
 
 
-
 
NC_004311  BRA0305  sugar ABC transporter, permease protein  36.34 
 
 
325 aa  197  3e-49  Brucella suis 1330  Bacteria  normal  0.0474821  n/a   
 
 
-
 
NC_012034  Athe_2309  binding-protein-dependent transport systems inner membrane component  43.51 
 
 
427 aa  197  3e-49  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.00000129291  n/a   
 
 
-
 
NC_009504  BOV_A0280  sugar ABC transporter, permease protein  36.34 
 
 
325 aa  196  3e-49  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_5492  binding-protein-dependent transport systems inner membrane component  36.68 
 
 
328 aa  196  4.0000000000000005e-49  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.511246  normal  0.17987 
 
 
-
 
NC_013525  Tter_0398  binding-protein-dependent transport systems inner membrane component  36.39 
 
 
312 aa  194  2e-48  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013411  GYMC61_2958  binding-protein-dependent transport systems inner membrane component  42.62 
 
 
435 aa  193  3e-48  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010483  TRQ2_0971  binding-protein-dependent transport systems inner membrane component  36.99 
 
 
293 aa  190  2.9999999999999997e-47  Thermotoga sp. RQ2  Bacteria  normal  0.0994152  n/a   
 
 
-
 
NC_009486  Tpet_0955  binding-protein-dependent transport systems inner membrane component  36.99 
 
 
293 aa  190  2.9999999999999997e-47  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_2236  binding-protein-dependent transport systems inner membrane component  35.25 
 
 
315 aa  189  4e-47  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_3354  binding-protein-dependent transport systems inner membrane component  37.32 
 
 
299 aa  188  1e-46  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009616  Tmel_1819  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
293 aa  185  1.0000000000000001e-45  Thermosipho melanesiensis BI429  Bacteria  normal  0.215175  n/a   
 
 
-
 
NC_009718  Fnod_0449  binding-protein-dependent transport systems inner membrane component  33.56 
 
 
295 aa  183  3e-45  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  0.982578  n/a   
 
 
-
 
NC_009654  Mmwyl1_0024  binding-protein-dependent transport systems inner membrane component  36.91 
 
 
320 aa  183  3e-45  Marinomonas sp. MWYL1  Bacteria  normal  0.227719  normal  0.433481 
 
 
-
 
NC_013530  Xcel_2796  binding-protein-dependent transport systems inner membrane component  39.6 
 
 
355 aa  183  4.0000000000000006e-45  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_0259  binding-protein-dependent transport systems inner membrane component  34.1 
 
 
324 aa  181  2e-44  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_3145  binding-protein-dependent transport systems inner membrane component  37.21 
 
 
303 aa  181  2e-44  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.236219 
 
 
-
 
NC_010003  Pmob_0028  binding-protein-dependent transport systems inner membrane component  34.77 
 
 
300 aa  180  2.9999999999999997e-44  Petrotoga mobilis SJ95  Bacteria  unclonable  0.0000000378352  n/a   
 
 
-
 
NC_008687  Pden_4441  binding-protein-dependent transport systems inner membrane component  36.02 
 
 
320 aa  179  4e-44  Paracoccus denitrificans PD1222  Bacteria  normal  0.0272526  normal 
 
 
-
 
NC_008025  Dgeo_0590  binding-protein-dependent transport systems inner membrane component  37.58 
 
 
315 aa  178  8e-44  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.273483  normal 
 
 
-
 
NC_011729  PCC7424_1896  binding-protein-dependent transport systems inner membrane component  35.66 
 
 
296 aa  178  9e-44  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  1.0543799999999999e-20 
 
 
-
 
NC_014212  Mesil_1016  binding-protein-dependent transport systems inner membrane component  39.08 
 
 
301 aa  178  9e-44  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_1990  binding-protein-dependent transport systems inner membrane component  35.49 
 
 
306 aa  174  1.9999999999999998e-42  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.306567  n/a   
 
 
-
 
NC_007604  Synpcc7942_0949  permease protein of sugar ABC transporter  36.92 
 
 
292 aa  169  5e-41  Synechococcus elongatus PCC 7942  Bacteria  normal  0.688345  normal 
 
 
-
 
NC_011899  Hore_19880  binding-protein-dependent transport systems inner membrane component  34.85 
 
 
323 aa  164  2.0000000000000002e-39  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0761  binding-protein dependent transport system inner membrane protein  36.86 
 
 
320 aa  162  9e-39  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0629996  normal  0.824676 
 
 
-
 
NC_009620  Smed_4397  binding-protein-dependent transport systems inner membrane component  36.84 
 
 
297 aa  161  2e-38  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.439093 
 
 
-
 
NC_013946  Mrub_2089  binding-protein-dependent transport systems inner membrane component  38.21 
 
 
293 aa  160  4e-38  Meiothermus ruber DSM 1279  Bacteria  decreased coverage  0.000000240561  normal  0.90976 
 
 
-
 
NC_011886  Achl_0624  binding-protein-dependent transport systems inner membrane component  34.04 
 
 
345 aa  158  1e-37  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.65014 
 
 
-
 
NC_009664  Krad_4016  binding-protein-dependent transport systems inner membrane component  34.58 
 
 
338 aa  157  2e-37  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0789775 
 
 
-
 
NC_008146  Mmcs_2419  binding-protein-dependent transport systems inner membrane component  34.92 
 
 
286 aa  157  3e-37  Mycobacterium sp. MCS  Bacteria  normal  0.235933  n/a   
 
 
-
 
NC_008705  Mkms_2464  binding-protein-dependent transport systems inner membrane component  34.92 
 
 
286 aa  157  3e-37  Mycobacterium sp. KMS  Bacteria  normal  0.80505  normal 
 
 
-
 
NC_009077  Mjls_2458  binding-protein-dependent transport systems inner membrane component  34.92 
 
 
286 aa  157  3e-37  Mycobacterium sp. JLS  Bacteria  normal  0.524108  normal 
 
 
-
 
NC_008699  Noca_0870  binding-protein-dependent transport systems inner membrane component  31.32 
 
 
309 aa  156  5.0000000000000005e-37  Nocardioides sp. JS614  Bacteria  normal  0.800905  n/a   
 
 
-
 
NC_013131  Caci_2623  binding-protein-dependent transport systems inner membrane component  32.49 
 
 
330 aa  155  9e-37  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0584633  normal 
 
 
-
 
NC_010003  Pmob_0306  binding-protein-dependent transport systems inner membrane component  33.85 
 
 
294 aa  155  1e-36  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_013124  Afer_1330  binding-protein-dependent transport systems inner membrane component  33.22 
 
 
316 aa  153  4e-36  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1261  binding-protein dependent transport system inner membrane protein  34.83 
 
 
298 aa  152  7e-36  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.196832  n/a   
 
 
-
 
NC_009338  Mflv_3776  binding-protein-dependent transport systems inner membrane component  31.91 
 
 
286 aa  152  8.999999999999999e-36  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.771132  normal  0.363599 
 
 
-
 
NC_010003  Pmob_0073  binding-protein-dependent transport systems inner membrane component  30.77 
 
 
294 aa  151  1e-35  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3328  binding-protein-dependent transport systems inner membrane component  30.56 
 
 
304 aa  152  1e-35  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_009667  Oant_0362  binding-protein-dependent transport systems inner membrane component  31.16 
 
 
312 aa  149  4e-35  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.541424  n/a   
 
 
-
 
NC_012848  Rleg_5199  binding-protein-dependent transport systems inner membrane component  30.62 
 
 
312 aa  149  6e-35  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0867066 
 
 
-
 
NC_009675  Anae109_1696  binding-protein-dependent transport systems inner membrane component  37.85 
 
 
291 aa  148  1.0000000000000001e-34  Anaeromyxobacter sp. Fw109-5  Bacteria  hitchhiker  0.00180742  normal 
 
 
-
 
NC_012669  Bcav_1681  binding-protein-dependent transport systems inner membrane component  33.45 
 
 
316 aa  148  1.0000000000000001e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.130846  normal 
 
 
-
 
NC_009664  Krad_4401  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
316 aa  147  2.0000000000000003e-34  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_2458  binding-protein-dependent transport systems inner membrane component  35.11 
 
 
299 aa  145  7.0000000000000006e-34  Meiothermus ruber DSM 1279  Bacteria  normal  0.610005  normal  0.71076 
 
 
-
 
NC_011368  Rleg2_5469  binding-protein-dependent transport systems inner membrane component  32.4 
 
 
313 aa  145  9e-34  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.394829 
 
 
-
 
NC_004578  PSPTO_0888  sugar ABC transporter, permease protein  35.15 
 
 
320 aa  145  1e-33  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.392731  n/a   
 
 
-
 
NC_007494  RSP_3673  ABC sugar transporter, inner membrane subunit  32.12 
 
 
308 aa  144  2e-33  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.246744  n/a   
 
 
-
 
NC_008686  Pden_1048  binding-protein-dependent transport systems inner membrane component  32.61 
 
 
308 aa  144  2e-33  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_009050  Rsph17029_3408  binding-protein-dependent transport systems inner membrane component  32.12 
 
 
308 aa  144  2e-33  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.166359  normal  0.855546 
 
 
-
 
NC_008699  Noca_3682  binding-protein-dependent transport systems inner membrane component  35.71 
 
 
283 aa  143  3e-33  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_7050  binding-protein-dependent transport systems inner membrane component  34.47 
 
 
330 aa  143  4e-33  Frankia sp. EAN1pec  Bacteria  normal  0.0817185  normal 
 
 
-
 
NC_009664  Krad_2091  binding-protein-dependent transport systems inner membrane component  32.04 
 
 
292 aa  142  5e-33  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_009486  Tpet_0645  binding-protein-dependent transport systems inner membrane component  33.57 
 
 
309 aa  141  9.999999999999999e-33  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000282921  n/a   
 
 
-
 
NC_008726  Mvan_2623  binding-protein-dependent transport systems inner membrane component  31.37 
 
 
287 aa  141  1.9999999999999998e-32  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3982  binding-protein-dependent transport systems inner membrane component  31.12 
 
 
316 aa  139  3.9999999999999997e-32  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_0049  binding-protein-dependent transport systems inner membrane component  31.56 
 
 
295 aa  140  3.9999999999999997e-32  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013744  Htur_4398  binding-protein-dependent transport systems inner membrane component  29.77 
 
 
314 aa  139  4.999999999999999e-32  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.0144983  n/a   
 
 
-
 
NC_009708  YpsIP31758_2171  carbohydrate ABC transporter permease  33.58 
 
 
280 aa  139  4.999999999999999e-32  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.0580768  n/a   
 
 
-
 
NC_012848  Rleg_4864  binding-protein-dependent transport systems inner membrane component  32.37 
 
 
319 aa  139  4.999999999999999e-32  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.243677  normal  0.263269 
 
 
-
 
NC_013172  Bfae_25440  carbohydrate ABC transporter membrane protein  31 
 
 
323 aa  139  6e-32  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0243999  n/a   
 
 
-
 
NC_011369  Rleg2_3668  binding-protein-dependent transport systems inner membrane component  31.88 
 
 
299 aa  139  6e-32  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_010483  TRQ2_0670  binding-protein-dependent transport systems inner membrane component  34.69 
 
 
294 aa  139  7e-32  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_2284  binding-protein-dependent transport systems inner membrane component  30.6 
 
 
291 aa  138  1e-31  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.257134 
 
 
-
 
NC_010465  YPK_2279  binding-protein-dependent transport systems inner membrane component  33.59 
 
 
286 aa  138  1e-31  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_2595  binding-protein-dependent transport systems inner membrane component  30 
 
 
318 aa  138  1e-31  Mycobacterium sp. JLS  Bacteria  normal  0.177004  normal  0.445691 
 
 
-
 
NC_010552  BamMC406_4681  binding-protein-dependent transport systems inner membrane component  36.68 
 
 
289 aa  138  1e-31  Burkholderia ambifaria MC40-6  Bacteria  normal  0.205446  normal 
 
 
-
 
NC_008146  Mmcs_2556  binding-protein-dependent transport systems inner membrane component  29.69 
 
 
318 aa  137  2e-31  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_2601  binding-protein-dependent transport systems inner membrane component  29.69 
 
 
318 aa  137  2e-31  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_2900  binding-protein-dependent transport systems inner membrane component  29.68 
 
 
295 aa  137  2e-31  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_008048  Sala_1022  binding-protein-dependent transport systems inner membrane component  31.63 
 
 
294 aa  137  3.0000000000000003e-31  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_7824  putative ABC transporter permease protein  30.11 
 
 
295 aa  137  3.0000000000000003e-31  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_2296  binding-protein-dependent transport systems inner membrane component  32.87 
 
 
304 aa  137  3.0000000000000003e-31  Serratia proteamaculans 568  Bacteria  normal  0.44429  normal 
 
 
-
 
NC_010159  YpAngola_A2083  carbohydrate ABC transporter permease  33.21 
 
 
286 aa  136  5e-31  Yersinia pestis Angola  Bacteria  normal  normal  0.0183943 
 
 
-
 
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