46 homologs were found in PanDaTox collection
for query gene Avin_00800 on replicon NC_012560
Organism: Azotobacter vinelandii DJ



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012560  Avin_00800  hypothetical protein  100 
 
 
227 aa  471  1e-132  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_72520  hypothetical protein  79.2 
 
 
229 aa  365  1e-100  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_6297  hypothetical protein  79.65 
 
 
229 aa  366  1e-100  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0458  hypothetical protein  60.68 
 
 
234 aa  286  2e-76  Halorhodospira halophila SL1  Bacteria  normal  0.656817  n/a   
 
 
-
 
NC_007947  Mfla_2542  hypothetical protein  58.23 
 
 
237 aa  282  4.0000000000000003e-75  Methylobacillus flagellatus KT  Bacteria  normal  0.158289  normal 
 
 
-
 
NC_008340  Mlg_1470  hypothetical protein  59.83 
 
 
229 aa  281  4.0000000000000003e-75  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.330272  normal  0.113816 
 
 
-
 
NC_008740  Maqu_1084  ribonucleotide reductase, alpha subunit  54.74 
 
 
232 aa  278  4e-74  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I1269  hypothetical protein  51.3 
 
 
229 aa  246  3e-64  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_3488  hypothetical protein  48.93 
 
 
216 aa  221  7e-57  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_2949  putative Vitamin B12-dependent ribonucleotide reductase  48.33 
 
 
765 aa  195  5.000000000000001e-49  Dinoroseobacter shibae DFL 12  Bacteria  normal  decreased coverage  0.00955068 
 
 
-
 
NC_007802  Jann_0951  ribonucleotide reductase large subunit  51.03 
 
 
757 aa  191  7e-48  Jannaschia sp. CCS1  Bacteria  normal  normal  0.13792 
 
 
-
 
NC_008686  Pden_0951  ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent  46.46 
 
 
754 aa  190  2e-47  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_007494  RSP_3547  ribonucleotide reductase  48.24 
 
 
755 aa  184  1.0000000000000001e-45  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.375819  n/a   
 
 
-
 
NC_009050  Rsph17029_3230  ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent  48.24 
 
 
755 aa  184  1.0000000000000001e-45  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009429  Rsph17025_3514  hypothetical protein  48.74 
 
 
753 aa  181  9.000000000000001e-45  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.489826  normal 
 
 
-
 
NC_009719  Plav_1591  ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent  47.69 
 
 
771 aa  174  9.999999999999999e-43  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.784862 
 
 
-
 
NC_009484  Acry_0185  ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent  47.37 
 
 
761 aa  171  1e-41  Acidiphilium cryptum JF-5  Bacteria  normal  0.87733  n/a   
 
 
-
 
NC_010338  Caul_3858  ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent  46.32 
 
 
744 aa  161  8.000000000000001e-39  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_2085  hypothetical protein  60.17 
 
 
131 aa  145  4.0000000000000006e-34  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.0481295 
 
 
-
 
NC_007643  Rru_A3258  ribonucleotide reductase large subunit  37.97 
 
 
786 aa  109  4.0000000000000004e-23  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_013202  Hmuk_1766  ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent  28.46 
 
 
1053 aa  72  0.000000000006  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.12495  normal  0.408298 
 
 
-
 
NC_013158  Huta_1290  ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent  29.61 
 
 
1039 aa  68.6  0.00000000007  Halorhabdus utahensis DSM 12940  Archaea  normal  n/a   
 
 
-
 
NC_007347  Reut_A2113  ribonucleotide reductase large subunit  30.09 
 
 
828 aa  67.4  0.0000000002  Ralstonia eutropha JMP134  Bacteria  normal  0.325185  n/a   
 
 
-
 
NC_013889  TK90_0257  ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent  30.29 
 
 
235 aa  66.2  0.0000000004  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.636631  normal  0.522668 
 
 
-
 
NC_008826  Mpe_B0385  putative ribonucleotide reductase protein  30.23 
 
 
862 aa  63.9  0.000000002  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.633147 
 
 
-
 
NC_013743  Htur_2137  ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent  27.83 
 
 
1042 aa  56.2  0.0000004  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013223  Dret_0006  ribonucleotide-diphosphate reductase subunit alpha  28.27 
 
 
742 aa  56.2  0.0000004  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_0113  ribonucleotide-diphosphate reductase subunit alpha  29.84 
 
 
745 aa  56.2  0.0000004  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_013922  Nmag_0059  ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent  27.56 
 
 
1416 aa  55.5  0.0000006  Natrialba magadii ATCC 43099  Archaea  normal  0.684931  n/a   
 
 
-
 
NC_012029  Hlac_2375  ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent  25.45 
 
 
1056 aa  54.3  0.000001  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  normal 
 
 
-
 
NC_013173  Dbac_3117  ribonucleotide-diphosphate reductase subunit alpha  27.18 
 
 
744 aa  53.9  0.000002  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_2130  ribonucleotide reductase large subunit  27.07 
 
 
832 aa  53.1  0.000003  Cupriavidus metallidurans CH34  Bacteria  normal  0.964032  normal  0.427551 
 
 
-
 
NC_011769  DvMF_2031  ribonucleotide-diphosphate reductase subunit alpha  26.7 
 
 
770 aa  50.8  0.00002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013205  Aaci_1886  ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent  25.91 
 
 
1065 aa  49.7  0.00004  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_009718  Fnod_0421  ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent  26.29 
 
 
841 aa  49.7  0.00004  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0018  ribonucleotide-diphosphate reductase subunit alpha  27.23 
 
 
781 aa  47.8  0.0001  Desulfovibrio vulgaris DP4  Bacteria  normal  0.132839  normal 
 
 
-
 
NC_010718  Nther_0149  ribonucleotide-diphosphate reductase subunit alpha  27.08 
 
 
752 aa  47.4  0.0002  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_3305  ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent  26.75 
 
 
851 aa  46.2  0.0004  Burkholderia phymatum STM815  Bacteria  normal  0.725004  normal 
 
 
-
 
NC_011831  Cagg_2767  ribonucleotide-diphosphate reductase subunit alpha  23.87 
 
 
820 aa  45.4  0.0007  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.705593  normal 
 
 
-
 
NC_011661  Dtur_1383  ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent  27.91 
 
 
749 aa  45.4  0.0007  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.148488  n/a   
 
 
-
 
NC_009012  Cthe_0053  ribonucleotide-diphosphate reductase subunit alpha  24.07 
 
 
794 aa  45.1  0.001  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.0216352  n/a   
 
 
-
 
NC_008148  Rxyl_2874  ribonucleotide-diphosphate reductase subunit alpha  26.98 
 
 
747 aa  43.5  0.003  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_0251  ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent  25.84 
 
 
1010 aa  42.7  0.005  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.797447  normal 
 
 
-
 
NC_007950  Bpro_5497  ribonucleotide reductase large subunit  27.67 
 
 
858 aa  42.4  0.006  Polaromonas sp. JS666  Bacteria  normal  0.0199014  normal  0.653858 
 
 
-
 
NC_008781  Pnap_3755  ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent  25.61 
 
 
1184 aa  42.4  0.007  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.561834 
 
 
-
 
NC_014212  Mesil_1317  ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent  38 
 
 
1014 aa  42  0.008  Meiothermus silvanus DSM 9946  Bacteria  normal  0.163268  normal  0.295376 
 
 
-
 
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