Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3488 |
Symbol | |
ID | 4481960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 4358322 |
End bp | 4358972 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639724236 |
Product | hypothetical protein |
Protein accession | YP_867379 |
Protein GI | 117926762 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGTCA CGATTGAGAA AAAGATTGTG GGTTTTGAGG TTGTCTCTGA TGTTCCCAAG ACGGAAGCAG AAGAGGAGAA GCGTCCAACC GGTGGGGCCG AGGTGATCCG CATGCAGCCT TTGTTGCAGC GTCCACCGGA ACTGCGGGGC ACCACCTATA AAATTGCGAC GCCCATGTCG GAGCATGCAC TCTATATTAC CATCAACGAT ATTGTGGTGA ATGAGGGCAC CGATCGGGAG CATCTGCGCC CCTTTGAGAT CTTTATTAAC TCCAAAAACA TGGAGAACTT CTCTTGGATT GTGGCTCTGA CCCGCGTGCT GTCGGCGGTG TTTCGTCATG GCGGAGAGGT TTCGTTTTTG GTGGAGGAGC TGCGTTCGGT GTTTGATCCC CGGGGTGGTT ATTATAAGCC CGGTGGTAAA TATATGCCCA GCTTGGTGGC AGAGATTGGT GAGTGCATCG AGAAGCACCT GTTGGATATT GGTATGATTC ACGCGCAGGA GGTGAGCGCG GAGCTGCGTG AGAAACGCAA ACAGGCGGAG AAGCAGGGTA TGTTGGGGGG GAGTTTGTGT CCCAAGTGTA GCCAGCTGTC GGTGGTCCGT CTGGATGGCT GCGAGACCTG CCTGGAGTGT GGTTATTCCA AGTGTGGCTG A
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Protein sequence | MSVTIEKKIV GFEVVSDVPK TEAEEEKRPT GGAEVIRMQP LLQRPPELRG TTYKIATPMS EHALYITIND IVVNEGTDRE HLRPFEIFIN SKNMENFSWI VALTRVLSAV FRHGGEVSFL VEELRSVFDP RGGYYKPGGK YMPSLVAEIG ECIEKHLLDI GMIHAQEVSA ELREKRKQAE KQGMLGGSLC PKCSQLSVVR LDGCETCLEC GYSKCG
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