| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1591 |
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| Symbol | |
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| ID | 5453435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1727404 |
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| End bp | 1729719 |
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| Gene Length | 2316 bp |
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| Protein Length | 771 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640877164 |
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| Product | ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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| Protein accession | YP_001412867 |
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| Protein GI | 154252043 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.784862 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCGA TCGCCGAACA GATTTGGGAT ATGAAATACC GCCTGCACGG GCCGGACGGC
ACCCCCGTCG ACCTGACCGT GGACGATAGC TGGCGGCGCG TGGCCAACGC GCTGGCGGAG
GCGGAAGCCC CCGAGGCGCG CGCGCACTGG GCAAAGCGTT TTCATGAGGC GATGGCGGGC
TACCGCTTCC TGCCCGCCGG CCGCATTCTC GCGGGCGCAG GTACGGGGCG CGACGTGACG
CTCTTCAATT GCTTCGTGAT GGGCGAAATC CCCGACACGA TGGAAGGCAT TTTCCAGAAC
CTGAAGGAAG CCGCGCTGAC CATGCAGCAG GGCGGCGGCA TCGGCTACGA CTTCTCGACA
TTGCGCCCGA AGGGCGCGCC GGTGAAGGGC GTGGGCGCGG ACGCGTCCGG CCCCCTCTCC
TTCATGGATG TCTGGGACGC GATGTGCCGC ACCATCATGT CGGCAGGCTC GCGCCGCGGC
GCCATGATGG CGACCATGCG CTGCGACCAT CCCGACATCG AAGCCTTTAT CGAGGCGAAG
CAGGAGCCGG GCCGCCTCAC CATGTTCAAC CTCTCGGTGC TCGCGACCGA CGCCTTCATG
GCGGCGGTGA AGGCGGATGC CGACTGGGAA CTGACTTTTG GCGGCACCGT GTTCAAGACA
CTGAAGGCGC GCGCGCTCTG GGACCGGATC ATCGCCGCGA CCTATGCCTA TGCCGAGCCC
GGCGTCATCT TCATCGACCG CATCAATGCG CGGAACAATC TCTATTACGC GGAGACGATC
CACGCGACGA ACCCCTGCGG CGAACAACCG CTTCCTCCCT ATGGCGCCTG CCTTCTCGGC
TCGATCAATC TCGCGGCGCT GGTGAAGGAA CCCTTCACCG AAAACGCGCA TATCGACGAA
AGCGAATTGT CGGAACTCGT GCATGTTGCC GTGCGCGCGA TGGACAACAC GATCGACGTA
TCGCGCTTTC CGCTGCCCGA GCAGCGCCAT GAGGCCACGG CGAAGCGCCG CATCGGCCTC
GGCGTGACCG GCCTCGCCGA CGCGCTCATC ATGTGCCGCG CGCGCTATGG CTCGGAAGCC
TCCGTCACGC TTATCCGCAA ATGGATGAAG GTGCTCTCGC GCGCGGCCTA TCTCGCCTCT
GTCGACATTG CGAAGGAGAA GGGCCCTTTC CTCCTTTTCG TCGCCGACGC CTATCTCGCG
GGCGAAACAA TCTCGGCGCT CGACAAGGAT ATTCGCGACG CCATTGCCGA ACACGGCATC
CGCAATGCGC TCGTGACGTC GATTGCGCCG ACCGGCACGA TTTCGCTCTT CGCGGGAAAC
GTCTCTTCGG GTATCGAGCC CGTCTTCGCC TATGGCTACA AGCGCAAGGT ACTGATGCCG
GACGGCACGC GGCGCGAGGA ACATGTGCGC GACCAGGCGG TGGAGAAATT CCGCGAAATG
TTCGGCGCCG AAGCGGCGTT GCCGGACTAT TTCGTCAACG CCCAGGACCT TTCGCCCGCA
GCACACATCG CGGTGCAGGC CGCCGTGCAG GACTATATCG ACAGCTCGAT CTCGAAGACG
ATCAATGTAC CTGCGGATAT TTCCTTCGAC GATTTCAAGA GCGTCTATAT GGACGCTTAC
GAGAAGGGCC TGAAGGGCTG CACGACCTAT CGGCCGAGCG ATGTGCGGGG CTCCGTGCTG
TCGCTTGAGG AGGCACCCGC CGAAGCGCCG CAAGCCGCGC TGCCGCTTGA CGCACCCGCC
GCCGGCGAGC GGTATGAAAA GGACGGCGTC GTCTATATGT CGAAGCCGCT CGAACGCGAG
ACAGTACTGC CGGGTTTCAC CTACAAGCTG CAATGGCCGG AAAGCGACCA CGCGATCTAC
ATAACCATCA ATGATATTCT GCAGGATGGC AGGCGCCGCC CCTTCGAGAT TTTCATCAAC
TCGAAGAACA TGGAGCACTA CGCATGGACG GTGGCGCTGA CGCGGATGAT CTCGGCCGTC
TTCCGGCGCG GCGGCGATGT GACCTTCGTG GTGGAAGAGC TGAAGGCGGT GTTCGATCCG
CGCGGTGGCT CATGGATGAA AGGCCGCTAT GTGCCGAGCC TGCTTGCCGC CATTGGCGAG
GTGATCGAGC AGCATATGAT CGACACCGGC TTCATTGCCG CGAAGGACGG ACGCCCGGTG
ACGGAAGCCC TGCGTGCGGT CGCCGGAGGC CCGCCGCCGC TGCAAAACCC GGTCATAACC
GGCCTCAAGG GGTGCCCGCG CTGCGGCGAG CGCGGCATGG TGCGCCAGGA AGGCTGTGAA
ACCTGCACCG CCTGCGGTTA CTCGAAGTGC AGCTGA
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| Protein sequence | MKAIAEQIWD MKYRLHGPDG TPVDLTVDDS WRRVANALAE AEAPEARAHW AKRFHEAMAG
YRFLPAGRIL AGAGTGRDVT LFNCFVMGEI PDTMEGIFQN LKEAALTMQQ GGGIGYDFST
LRPKGAPVKG VGADASGPLS FMDVWDAMCR TIMSAGSRRG AMMATMRCDH PDIEAFIEAK
QEPGRLTMFN LSVLATDAFM AAVKADADWE LTFGGTVFKT LKARALWDRI IAATYAYAEP
GVIFIDRINA RNNLYYAETI HATNPCGEQP LPPYGACLLG SINLAALVKE PFTENAHIDE
SELSELVHVA VRAMDNTIDV SRFPLPEQRH EATAKRRIGL GVTGLADALI MCRARYGSEA
SVTLIRKWMK VLSRAAYLAS VDIAKEKGPF LLFVADAYLA GETISALDKD IRDAIAEHGI
RNALVTSIAP TGTISLFAGN VSSGIEPVFA YGYKRKVLMP DGTRREEHVR DQAVEKFREM
FGAEAALPDY FVNAQDLSPA AHIAVQAAVQ DYIDSSISKT INVPADISFD DFKSVYMDAY
EKGLKGCTTY RPSDVRGSVL SLEEAPAEAP QAALPLDAPA AGERYEKDGV VYMSKPLERE
TVLPGFTYKL QWPESDHAIY ITINDILQDG RRRPFEIFIN SKNMEHYAWT VALTRMISAV
FRRGGDVTFV VEELKAVFDP RGGSWMKGRY VPSLLAAIGE VIEQHMIDTG FIAAKDGRPV
TEALRAVAGG PPPLQNPVIT GLKGCPRCGE RGMVRQEGCE TCTACGYSKC S
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