| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_1886 |
|---|
| Symbol | |
|---|
| ID | 8425406 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | - |
|---|
| Start bp | 1932614 |
|---|
| End bp | 1935811 |
|---|
| Gene Length | 3198 bp |
|---|
| Protein Length | 1065 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 645028001 |
|---|
| Product | ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
|---|
| Protein accession | YP_003185287 |
|---|
| Protein GI | 258511853 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCATCG AACAACGGGA GAGGCCCATG CTGGACCTGA ACGACGACGA TTACCTGGGA
CCGACCGGTG AAAAGATCGT CGCCGACCGG TATTTGCTGA AGGACATCCG CAAGGAAGCG
CTCGCGCCAG GGGCGCTCGT CGTCGCCGTG TTGGACAAGA AGCGCGCGTA CCACGAGCTC
GCGCGCGTGA AGGCGGTGGA CCGCGATGCG GATCAGGTGA CGGTGGAGCT CCGGGACGGA
TCGATCGTGG ATCTGCCGGT GAGCCAGGTG GACGTGCTGC TCGAAACCTC TCCTCGGCAG
ATGTGGCGGC GTGTCGCCCG CGGCGCCGCA GCGGTCACGC GGCAGCCGGA GGTGTGGGAA
GAGGCGTTCT ACGAGCTTCA GAAGGGCTGG CGCTACGTCC CAGGCGGGCG AATCAACGCG
TCCCTCGGGA CGGGCATGCA GGTGACGAGC TACAACTGCT TCGTCATCCC GAACGTCGGC
CCCGACCTTC GCGACTACGC CGAATCGTTC GGCCAGACGC TTGAAATCCA GGCGCGAAGC
GGCGGCGTGG GCATGAACCT GTCTCGCATT CCGCCTCAGG GCACGCTCAT TCCCGTCAGC
ACCGCGTCGC GGAAGGCAGA GCTCATGCTG GTCCTGGACG CCTGGCACCC CGACCTCGTC
GACTTTTTGG AGACCGAGTA CCCTCATTCC ACGAAACTCG TCCGCGCCGA CGCCGCGTTT
TGGCGCGCCG TGGAGGAGGA CGACGAATGG GTGTTTCGGT TTCCGGATAC GTCGGTGGAG
GGGTATGACG AGAAATGGGC GGGCGATCTC GACGCCTGGT TGCGCCAGGG CCTGCCCGTC
GAGGAGCATG GGCGCATCCG CGCGCGCGAG CTGATGGAAA AGATCCTGGC CTCCGACGCT
CACCTTGTCC CGCAGGCTGT CGGATTCTGC CTGAGTCCTG GGGACAGCCG CAGCACCATC
GCGAGAACGC TCGGGGACAT GTGGGAGGCG ATGCGGGACG GCAAGCGCGT ATCGCTCGTT
CTGTCGTCGC TTCGCCCGCG CTACAGCTAC GTCCGCGGCG TGAACGGGCG ATCGTCCGGC
GCTTATTCGT GGGGGCTTTT GTACGACAAG GGCAATCAGG TGTTCGGCGA GGGCTTCGGC
CCCGTGGGCG TTGGGGAAAT CATGAGCGTG GGCTGCCAGC TCACGCTTCA GGGCGGTTCC
CGCCGCGGCG CCCTCATGCT CATTCTGAAC GACCGTCACG CCGACCTGCC CAAGTTTATC
CGCGCGAAGC AAGTTGACGG CGTCATCACG GGTGCCAACA TCAGCGTCGG CGTGTCCGAG
GAGTTCATGC AGGCAAAACG CCGCGGCGAG TCTTGGCAGC TCGGATTTGT CCCGCCGTCC
CACCGCGAGG CGTTCGATGG GGATTTCGGG CGCTGGCTCG AAGAAGGCAA ACCCTTCGAG
GTCACGGAAA CCATCTCCGC TGCAAAGCTG TGGCGCGACA TCTGTGAGTC GGCGTGGAAA
TCGGCCGAGC CGGGCGTCGT GTTTTTGGGA CGAGCCAACG CGATGAGCAA CTCGTGGTAT
TTCAACCCGC TCGTCGCCAC GAATCCGTGT GGGGAGCAGC CACTCCCACC CTATGGGATT
TGCAACCTCG GCGCGGTCGT GCTCGCTCGG TTTGCGAACG GCTTTCGCGA CAGTGGCGTT
CGGACCGAAT TCTCCGATCC TGAGCGCGAG GCCTATGTGC GATCCCTCCT TCTCGAGAAG
TTCCCCGCGG ACGAGGCGGA GTTTCTCCTG CATCACATTC GCTGGGAGGA GCTCGAGCTC
ACGACGCGCC GAGGGATTCG GTTTCAGGAT GCCGTGATCG ACGCGACCTA CTATCCGTTC
GAAGAAAACC GGCAGAACCA GATGTCGGAG CGCCGCGTGG GGCTTGGCAT CATGGGGCTG
CATGATCTGA TGCTCTACTG CGGCATTCGA TACGGATCGG AAGAAAGCGT CAAGCTGATC
GACGTGCTGA TGGGGCTCAT GGCGGAGTGG GCGTATCTCG AGTCCGTGGA GCTGGCGAAG
GAGTACGGGC CGTTCCCGAA GTTCGACGCG GAGAAGTTCC TGCAATCCGG CTTCATGCGC
CATATGGCGG CGGAGCGCCC GCATGTGGTC GAGGCCATTC GCAAGCATGG CGTGCGAAAC
GTCACGACCA TGACCATTGC GCCCACCGGC ACGACGGGCA CGATGGTCGG GTGCTCGACC
GGGTGCGAGC CGTACTACGC GTGGTCGTAT TTCCGCAACT CGCGCCTCGG CCTGTTCGAG
GAACACGCGG CCATCGTCGA GCAATATCGG CGCGAACATC CGAGCGAGGA GAGCCTGCCG
CCCTACTTCG TCACCGCCAT GGAGCTCACG CCGGAGGAGC ACGTCCGCGT GCAGGCCGCG
CTGCAGCGAT GGATCGACAG CTCCATCTCC AAGACGTGCA ACGCGCCGCA CTCGTACACG
GTGGAAGACA CCGTGAAATT GTACGATCTC GCCTACGAGC TCGGCTGCAA GGGCATCACC
ATCTACCGAG ACGGATCGCG CAGCGAGCAG GTGTTGTCGC TGAAGAAGGA CGACCAGGCG
GGAGATGGCG AGGGGGCCAA GGACACGGCA GCTTCCGCGC CGGTCGAGAA GTCGGCGCAA
CCGGCCCAGG TTGCTCCGGG CGGATACGTC AAGCGCCGGC GCCCCGACGT GCTGTATGGA
GCGACGTACC GCAAGGAGAC GCCGCTCGGA AAGGCGTTCA TCACCATCAA CGACGATCCG
GACACGCACA TGGCCACTGA GGTGTTCGTG AACGTCGGCA AGGCCGGATC GGACGTGTAT
GCGGCGAACG AGGCGCTCGG CCGGGCCATC ACGCTGTACC TGCGCGAGTC GAACAACCCG
AACCGCGAGG CGGAGTTGGT GAAACACTTC TCCGGCATCG GGGGCCAAAA TGCCGTGGGC
TTCGGCGCGC AGCGCATCAC GTCGGTGCCG GACGCCATCG CGAAGGCCCT GATCGAGCAC
GCCGAGACGT TCCCGCTCCG CCACATGGCG GCGCGCCAGG CGGCGACGTC TGCGCCGGAC
GAGGGCGACG GGGCGAAGCC GTCGGAGCTG AGGGCGTATT CCATCGCGAA GGATTGGTGT
CCCGAGTGCC ATCAGCACAC GCTGATTCGC CAGGGCGGGT GCTACGAATG TGAGGCGTGC
GGCTATAGCA AATGTTGA
|
|---|
| Protein sequence | MAIEQRERPM LDLNDDDYLG PTGEKIVADR YLLKDIRKEA LAPGALVVAV LDKKRAYHEL
ARVKAVDRDA DQVTVELRDG SIVDLPVSQV DVLLETSPRQ MWRRVARGAA AVTRQPEVWE
EAFYELQKGW RYVPGGRINA SLGTGMQVTS YNCFVIPNVG PDLRDYAESF GQTLEIQARS
GGVGMNLSRI PPQGTLIPVS TASRKAELML VLDAWHPDLV DFLETEYPHS TKLVRADAAF
WRAVEEDDEW VFRFPDTSVE GYDEKWAGDL DAWLRQGLPV EEHGRIRARE LMEKILASDA
HLVPQAVGFC LSPGDSRSTI ARTLGDMWEA MRDGKRVSLV LSSLRPRYSY VRGVNGRSSG
AYSWGLLYDK GNQVFGEGFG PVGVGEIMSV GCQLTLQGGS RRGALMLILN DRHADLPKFI
RAKQVDGVIT GANISVGVSE EFMQAKRRGE SWQLGFVPPS HREAFDGDFG RWLEEGKPFE
VTETISAAKL WRDICESAWK SAEPGVVFLG RANAMSNSWY FNPLVATNPC GEQPLPPYGI
CNLGAVVLAR FANGFRDSGV RTEFSDPERE AYVRSLLLEK FPADEAEFLL HHIRWEELEL
TTRRGIRFQD AVIDATYYPF EENRQNQMSE RRVGLGIMGL HDLMLYCGIR YGSEESVKLI
DVLMGLMAEW AYLESVELAK EYGPFPKFDA EKFLQSGFMR HMAAERPHVV EAIRKHGVRN
VTTMTIAPTG TTGTMVGCST GCEPYYAWSY FRNSRLGLFE EHAAIVEQYR REHPSEESLP
PYFVTAMELT PEEHVRVQAA LQRWIDSSIS KTCNAPHSYT VEDTVKLYDL AYELGCKGIT
IYRDGSRSEQ VLSLKKDDQA GDGEGAKDTA ASAPVEKSAQ PAQVAPGGYV KRRRPDVLYG
ATYRKETPLG KAFITINDDP DTHMATEVFV NVGKAGSDVY AANEALGRAI TLYLRESNNP
NREAELVKHF SGIGGQNAVG FGAQRITSVP DAIAKALIEH AETFPLRHMA ARQAATSAPD
EGDGAKPSEL RAYSIAKDWC PECHQHTLIR QGGCYECEAC GYSKC
|
|---|
| |