| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0113 |
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| Symbol | |
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| ID | 3756431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 104526 |
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| End bp | 106763 |
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| Gene Length | 2238 bp |
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| Protein Length | 745 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637780971 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_386609 |
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| Protein GI | 78355160 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACAGC CGGAAGACTT GCAGCCCGTT GTGCTCAACC AGAATGCAGA GGTCGTGCTT
TCGAAGCGTT ATTACCGCAA AGGCCCTGAC GGAGAACCGC TGGAAGATGC CACGGGGCTT
TTCTGGCGTG TGGCGTCTGC CATCGCGGCG GAGGAGGGTA AATACCCTGA TTCGTCGTGC
AGGGCGGACG AACTGGCCCG TGAATTTTAC GACCTGATGA CATCGTGGAA ATTTTTACCC
AATTCTCCCA CGCTGATGAA TGCGGGCACT GATCTGGGTC AGCTGGCGGC CTGTTTTGTG
CTGCCGGTGG GTGATTCCAT AGAAGAGATT TTTGACGCCG TGAAACATGC CGCCATGATT
CATAAATCAG GAGGCGGAAC AGGGTTTTCA TTCTCGCGCC TGCGTCCGGC GGCCAGCCGT
GTGGGGTCCA CGGGCGGGGT TGCCTCGGGC CCGCTTTCTT TTTTACGCAT TTTCAATACC
GCCACGGAGC AGATTAAGCA GGGAGGCACA CGCCGCGGGG CCAATATGGG CATTCTGCGT
GTGGACCATC CGGACATTCT GGAGTTCATC CGCGCCAAGG AACGTGAAGG GGAATTCAAT
AACTTCAACC TTTCCGTTGC GCTGACCGAA GACTTTATGA AGGCGGTGGA AAAAGGTGAA
GAATATCCTC TGATGGCGCC GCACTCCGGC GAAGCCAAAG GTACCCTGAA TGCCCGTGAG
GTGTTTGAGA TACTGGTGCA GAAAGCGTGG GAGTCGGGGG ATCCGGGCAT TGTTTTCATT
GACCGGATAA ACCGTGACAA CCCCACGCCC GCACAGGGCG AGATGGAGTC CACAAACCCG
TGCGGGGAGC AGCCACTGCT GCCTTACGAG GCCTGCAATC TCGGTTCCGT CAATCTGGCC
GGACTGTACC TTGCGGGGCA TGGCAGCACG GCAGATTCCA TAGACTGGGC AGAGCTTAAG
CGTATTATCA GGCTTTCCGT GCGTTTTCTG GATAATGTCA TCGATGCTTC GCGCTATCCG
CTGGACCGCA TAACAGAAAC GGTGCACAGA AACCGCAAAA TCGGGCTGGG CGTCATGGGC
TGGGCCGACC TGCTGTTTCA GCTGCGCATT CCCTACGACA GTCAGGATGC CGTTAAGCTT
GCCGGCCGTG TCATGGAATT CATCCGCGCG GAAGGCCGTG CCGCCTCCAA ACAGCTTGCC
AAGGAACGCG GACCCTTTCC GGCTTACGCC GAGTCAGTGT TCGGACAGCG GGACCTCGGA
CCATACCGCA ACGCCACCAT AACGACCATT GCCCCCACCG GAACCCTGTC CATTCTTGCG
GGATGCTCTT CCGGGGTTGA ACCGTTGTTT GCGCTCAGCT TTGCGCGGCA TGTCATGGAC
GGCGAGCGTC TGGTGGAAGT GAATCCTTAT TTTGAGCAGG CGCTCAAGGA CGAGCAGTGC
TATTCTGAAA AGCTGATGGA AGCTGTAACG CAGAAAGGGT CTGTGCAGAC AATGGAGCAC
CTGCCGCAGC ATATGCGCGA TGTTTTTGTG ACAGCCATGG ACATAGAGCC CGTATGGCAT
CTGAAAATGC AGGCGGCGTT TCAGGAATAT ACCGACAACG CCGTGTCCAA GACCGTCAAC
CTGCCCAACA GCGCAACCAT TGACGACATA CGCAGCATTT ACTGGATGGC GTATGAGCGG
GGCTGCAAGG GGGTTACCGT ATACCGTGAC GGCTGCAAAC AGTCGCAGGT TCTGTGCACC
GGCGACGGAG AAAAAAGCAA GGAAGAGCAG AAAAAAGAAC GCAGCGTTGT GCGTGAACGT
CCTGATATCG TATACGGATT TACCCAGAAA GTGGAAACGG GGCTGGGTGT GCTGTATGTG
ACTATTAACG AAGTGGACGG AAGGCCGTTT GAACTGTTCA CCACCATAGG CAAGTCGGGA
CGGTCCATCA CCGCAAAGGC GGAAGCCATC GGCAGACTGG TTTCGCTGGC GCTGCGCTCC
GGCGTTGAGG TGGTGGAAAT AGTGCGGCAG CTCAAGGGTA TAGGCGGAGA ACACCCCAAG
TTTCAGAAAA AAGGATTGCT GCTGTCCATA CCCGATGCCA TTGCATGGGT AATGGAAAAC
AGGTACCTAA AGGCCAAGGT GCCCGTACAC GCTCCCAACG GGCTCGGTAG GCAGCAGTGC
CCCGATTGCG ATGAAGAACT GGTGTTTCAG GAAGGCTGCC ATATCTGCCC TGCCTGCGGA
TTCACCAAAT GCGGCTGA
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| Protein sequence | MKQPEDLQPV VLNQNAEVVL SKRYYRKGPD GEPLEDATGL FWRVASAIAA EEGKYPDSSC
RADELAREFY DLMTSWKFLP NSPTLMNAGT DLGQLAACFV LPVGDSIEEI FDAVKHAAMI
HKSGGGTGFS FSRLRPAASR VGSTGGVASG PLSFLRIFNT ATEQIKQGGT RRGANMGILR
VDHPDILEFI RAKEREGEFN NFNLSVALTE DFMKAVEKGE EYPLMAPHSG EAKGTLNARE
VFEILVQKAW ESGDPGIVFI DRINRDNPTP AQGEMESTNP CGEQPLLPYE ACNLGSVNLA
GLYLAGHGST ADSIDWAELK RIIRLSVRFL DNVIDASRYP LDRITETVHR NRKIGLGVMG
WADLLFQLRI PYDSQDAVKL AGRVMEFIRA EGRAASKQLA KERGPFPAYA ESVFGQRDLG
PYRNATITTI APTGTLSILA GCSSGVEPLF ALSFARHVMD GERLVEVNPY FEQALKDEQC
YSEKLMEAVT QKGSVQTMEH LPQHMRDVFV TAMDIEPVWH LKMQAAFQEY TDNAVSKTVN
LPNSATIDDI RSIYWMAYER GCKGVTVYRD GCKQSQVLCT GDGEKSKEEQ KKERSVVRER
PDIVYGFTQK VETGLGVLYV TINEVDGRPF ELFTTIGKSG RSITAKAEAI GRLVSLALRS
GVEVVEIVRQ LKGIGGEHPK FQKKGLLLSI PDAIAWVMEN RYLKAKVPVH APNGLGRQQC
PDCDEELVFQ EGCHICPACG FTKCG
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