Gene Cthe_0053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0053 
Symbol 
ID4808748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp69309 
End bp71693 
Gene Length2385 bp 
Protein Length794 aa 
Translation table11 
GC content43% 
IMG OID640105462 
Productribonucleotide-diphosphate reductase subunit alpha 
Protein accessionYP_001036487 
Protein GI125972577 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0209] Ribonucleotide reductase, alpha subunit 
TIGRFAM ID[TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0216352 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTAA CCGAAAACGC AATTAAAGTC CTGAAAAAAA GATATCTTGC GAAGGATGAA 
AACGGAAATC TGCTGGAAGA CCCGGAGGGA ATGTTCAGAA GAGTTGCCAG GACTGTTGCA
TCTGCTGACA AAGAGTATGT CTCAGAGGAA GAGCTTAAAA GTATAGAGCA GGAATTCTAT
GATATGATGG TAAATCTTGA TTTTTTACCG AATTCGCCCA CTCTTATGAA TGCAGGAAGA
CCCTTGGGAC AGTTGAGTGC ATGTTTTGTT TTGCCTATAG AAGATACAAT GGAAGGAATA
TTTGAAACCA TAAAGAATGC TGCGCTTATA CATAAAAGCG GCGGTGGTAC CGGTTTTAGT
TTTTCACGCT TAAGACCCAA AGGAGCTTCG GTAAACTCCA CCGGAGGGGT TGCCAGCGGG
CCTGTGAGTT TCATGAAAGT ATTTAACGCT GCCACGGAGG CCGTAAAACA GGGTGGAACC
AGAAGGGGGG CCAATATGGG CATACTCCGT GTGGACCATC CCGATATTGT AGAATTTATA
ACATGCAAGA AGAACAACGC CGACATTACG AACTTTAATA TTAGCGTTGG TATAACGGAA
GAATTTATGA ATGCCGTTGA AAACAATGAA TATTACAATC TTGTTGAGCC TCATACAGGC
AAAATAGTTG GCAAGCAAAA TGCGAGAGAA ATATTTGATT TAATTGTTGA TATGGCGTGG
AACAACGGTG AGCCGGGAAT AATCTTTTTG GACAGGTTAA ACAAGGACAA TGTTACTCCC
GAACTGGGGG AAATTGAAAG CACAAATCCT TGCGGCGAGC AACCCTTGCT GCCTTATGAA
GCATGCAATC TGGGTTCAAT CAATTTAAGC AATATGTTAA AATATGTTGA CGGAAAACCG
GAAGTTGATT TTGCCAAACT TAGAACTACG GTATGGAAGG CCGTACATTT CCTCGATAAT
GTAATAGATG TAAACAAATA TCCTTTGCCT GAAATTGACA AAATGACAAG GGGAACAAGA
AAAATAGGAC TGGGAGTTAT GGGATGGGCC GACATGCTTT GCAAACTGAA TATTCCTTAC
AACTCTCAGA GTTCGATAGA TCTTGCGGAA AAAATAATGC ATTTTATACA GGATGAGTCA
AGAAAAGCTT CCATGGAGCT GGCTGAAAAG AAGGGAGTAT TCCCTTATTA TGATAAAAGT
ATTTACAAGA ACCTTGGAAT CAGAGTAAGA AATGCCACTA CTACAACCAT AGCACCCACG
GGCACGTTGA GTATTATTGC CGGTGTGTCC AGCGGAATTG AGCCTTTGTT TGCAATTTCA
TATATAAGAA ATGTAATGGA TAATGATGAA CTTGTGGAGG TCAATCCGGT CTTCAAGCAG
GTGGCTAAAG AAGAAGGATT TTATTCCGAT GAGTTGATGA GAAGGATAGC AAAGAAAGGG
TCAATAAGAG GATTTGACGA GATACCGGAG TGGATTCAGG ATGTGTTTGT TACCGCCCAT
GACATTTCTC CGGACTGGCA TGTAAGAATG CAGGCCGCTT TCCAGAAGTA TACCGACAAT
GCAGTATCAA AAACCGTTAA TTTAAGAAAC GAGGCTACCC GCAAAGACGT TGCCGATGCT
TTCTGGCTTG CTTACAAGAC AAACTGCAAA GGTATAACGA TATACAGGGA CGGCAGCAGA
GATTTGCAGG TACTTAATAT TGGAAAAGTG AAAGGCAAGG AAGAAAGCGT TTCAAAAGCC
AGGGAAGAAG GCCCTGCAAA GCCCAAAGAG CAGATCAAGC CTGTATCGGG CATAGCCCCA
AGACCGAGAT CGGAGATAGC GACAGGCTTC ACCGAAAAGG TTAAGATAGG CTGCGGTAAT
TTGTACATAA CAGTAAATTA TGACGACTAT GGTATTTGTG AGGTATTTAC GAATACTGGA
CGGGCGGGAG GATGTCCTTC CCAGTCGGAA GCAACGGCAA GGCTTGTGTC TATCGCCCTT
CGTTCCGGAG TTGATTATAA ATACATTGTT GAGCAGCTGA AAGGTATAAG ATGTCCGTCG
ACAATAAGGC AGAAAGGTTT GAAGGTTCTG TCTTGTCCCG ACGCTATCGG AAGACTCATT
GAAAAGGTTG CAAAATTGCA GAACGGGCAG AAGATCATGG CAACTGAGGC TCATATCACA
GATGAACAAA GATTTCAACG GCCTACGGCA AATACCTATT ATAAATTTGA AGATGCGTCG
GAAGAGGAAG AAGTGGATTT TAGAATTGCA GAGCTGGAAA ATGATACAGA AGAAAATGAT
ACAGAAAATG CAGACACTGC GGTTTGTCCT GAGTGCGGCA GAAAAGTTGA GCACGAGGGC
GGCTGTGTGG TGTGCAGAAA CTGCGGATAT TCAAAATGCG GATAA
 
Protein sequence
MNLTENAIKV LKKRYLAKDE NGNLLEDPEG MFRRVARTVA SADKEYVSEE ELKSIEQEFY 
DMMVNLDFLP NSPTLMNAGR PLGQLSACFV LPIEDTMEGI FETIKNAALI HKSGGGTGFS
FSRLRPKGAS VNSTGGVASG PVSFMKVFNA ATEAVKQGGT RRGANMGILR VDHPDIVEFI
TCKKNNADIT NFNISVGITE EFMNAVENNE YYNLVEPHTG KIVGKQNARE IFDLIVDMAW
NNGEPGIIFL DRLNKDNVTP ELGEIESTNP CGEQPLLPYE ACNLGSINLS NMLKYVDGKP
EVDFAKLRTT VWKAVHFLDN VIDVNKYPLP EIDKMTRGTR KIGLGVMGWA DMLCKLNIPY
NSQSSIDLAE KIMHFIQDES RKASMELAEK KGVFPYYDKS IYKNLGIRVR NATTTTIAPT
GTLSIIAGVS SGIEPLFAIS YIRNVMDNDE LVEVNPVFKQ VAKEEGFYSD ELMRRIAKKG
SIRGFDEIPE WIQDVFVTAH DISPDWHVRM QAAFQKYTDN AVSKTVNLRN EATRKDVADA
FWLAYKTNCK GITIYRDGSR DLQVLNIGKV KGKEESVSKA REEGPAKPKE QIKPVSGIAP
RPRSEIATGF TEKVKIGCGN LYITVNYDDY GICEVFTNTG RAGGCPSQSE ATARLVSIAL
RSGVDYKYIV EQLKGIRCPS TIRQKGLKVL SCPDAIGRLI EKVAKLQNGQ KIMATEAHIT
DEQRFQRPTA NTYYKFEDAS EEEEVDFRIA ELENDTEEND TENADTAVCP ECGRKVEHEG
GCVVCRNCGY SKCG