Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0053 |
Symbol | |
ID | 4808748 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 69309 |
End bp | 71693 |
Gene Length | 2385 bp |
Protein Length | 794 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640105462 |
Product | ribonucleotide-diphosphate reductase subunit alpha |
Protein accession | YP_001036487 |
Protein GI | 125972577 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
TIGRFAM ID | [TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0216352 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTAA CCGAAAACGC AATTAAAGTC CTGAAAAAAA GATATCTTGC GAAGGATGAA AACGGAAATC TGCTGGAAGA CCCGGAGGGA ATGTTCAGAA GAGTTGCCAG GACTGTTGCA TCTGCTGACA AAGAGTATGT CTCAGAGGAA GAGCTTAAAA GTATAGAGCA GGAATTCTAT GATATGATGG TAAATCTTGA TTTTTTACCG AATTCGCCCA CTCTTATGAA TGCAGGAAGA CCCTTGGGAC AGTTGAGTGC ATGTTTTGTT TTGCCTATAG AAGATACAAT GGAAGGAATA TTTGAAACCA TAAAGAATGC TGCGCTTATA CATAAAAGCG GCGGTGGTAC CGGTTTTAGT TTTTCACGCT TAAGACCCAA AGGAGCTTCG GTAAACTCCA CCGGAGGGGT TGCCAGCGGG CCTGTGAGTT TCATGAAAGT ATTTAACGCT GCCACGGAGG CCGTAAAACA GGGTGGAACC AGAAGGGGGG CCAATATGGG CATACTCCGT GTGGACCATC CCGATATTGT AGAATTTATA ACATGCAAGA AGAACAACGC CGACATTACG AACTTTAATA TTAGCGTTGG TATAACGGAA GAATTTATGA ATGCCGTTGA AAACAATGAA TATTACAATC TTGTTGAGCC TCATACAGGC AAAATAGTTG GCAAGCAAAA TGCGAGAGAA ATATTTGATT TAATTGTTGA TATGGCGTGG AACAACGGTG AGCCGGGAAT AATCTTTTTG GACAGGTTAA ACAAGGACAA TGTTACTCCC GAACTGGGGG AAATTGAAAG CACAAATCCT TGCGGCGAGC AACCCTTGCT GCCTTATGAA GCATGCAATC TGGGTTCAAT CAATTTAAGC AATATGTTAA AATATGTTGA CGGAAAACCG GAAGTTGATT TTGCCAAACT TAGAACTACG GTATGGAAGG CCGTACATTT CCTCGATAAT GTAATAGATG TAAACAAATA TCCTTTGCCT GAAATTGACA AAATGACAAG GGGAACAAGA AAAATAGGAC TGGGAGTTAT GGGATGGGCC GACATGCTTT GCAAACTGAA TATTCCTTAC AACTCTCAGA GTTCGATAGA TCTTGCGGAA AAAATAATGC ATTTTATACA GGATGAGTCA AGAAAAGCTT CCATGGAGCT GGCTGAAAAG AAGGGAGTAT TCCCTTATTA TGATAAAAGT ATTTACAAGA ACCTTGGAAT CAGAGTAAGA AATGCCACTA CTACAACCAT AGCACCCACG GGCACGTTGA GTATTATTGC CGGTGTGTCC AGCGGAATTG AGCCTTTGTT TGCAATTTCA TATATAAGAA ATGTAATGGA TAATGATGAA CTTGTGGAGG TCAATCCGGT CTTCAAGCAG GTGGCTAAAG AAGAAGGATT TTATTCCGAT GAGTTGATGA GAAGGATAGC AAAGAAAGGG TCAATAAGAG GATTTGACGA GATACCGGAG TGGATTCAGG ATGTGTTTGT TACCGCCCAT GACATTTCTC CGGACTGGCA TGTAAGAATG CAGGCCGCTT TCCAGAAGTA TACCGACAAT GCAGTATCAA AAACCGTTAA TTTAAGAAAC GAGGCTACCC GCAAAGACGT TGCCGATGCT TTCTGGCTTG CTTACAAGAC AAACTGCAAA GGTATAACGA TATACAGGGA CGGCAGCAGA GATTTGCAGG TACTTAATAT TGGAAAAGTG AAAGGCAAGG AAGAAAGCGT TTCAAAAGCC AGGGAAGAAG GCCCTGCAAA GCCCAAAGAG CAGATCAAGC CTGTATCGGG CATAGCCCCA AGACCGAGAT CGGAGATAGC GACAGGCTTC ACCGAAAAGG TTAAGATAGG CTGCGGTAAT TTGTACATAA CAGTAAATTA TGACGACTAT GGTATTTGTG AGGTATTTAC GAATACTGGA CGGGCGGGAG GATGTCCTTC CCAGTCGGAA GCAACGGCAA GGCTTGTGTC TATCGCCCTT CGTTCCGGAG TTGATTATAA ATACATTGTT GAGCAGCTGA AAGGTATAAG ATGTCCGTCG ACAATAAGGC AGAAAGGTTT GAAGGTTCTG TCTTGTCCCG ACGCTATCGG AAGACTCATT GAAAAGGTTG CAAAATTGCA GAACGGGCAG AAGATCATGG CAACTGAGGC TCATATCACA GATGAACAAA GATTTCAACG GCCTACGGCA AATACCTATT ATAAATTTGA AGATGCGTCG GAAGAGGAAG AAGTGGATTT TAGAATTGCA GAGCTGGAAA ATGATACAGA AGAAAATGAT ACAGAAAATG CAGACACTGC GGTTTGTCCT GAGTGCGGCA GAAAAGTTGA GCACGAGGGC GGCTGTGTGG TGTGCAGAAA CTGCGGATAT TCAAAATGCG GATAA
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Protein sequence | MNLTENAIKV LKKRYLAKDE NGNLLEDPEG MFRRVARTVA SADKEYVSEE ELKSIEQEFY DMMVNLDFLP NSPTLMNAGR PLGQLSACFV LPIEDTMEGI FETIKNAALI HKSGGGTGFS FSRLRPKGAS VNSTGGVASG PVSFMKVFNA ATEAVKQGGT RRGANMGILR VDHPDIVEFI TCKKNNADIT NFNISVGITE EFMNAVENNE YYNLVEPHTG KIVGKQNARE IFDLIVDMAW NNGEPGIIFL DRLNKDNVTP ELGEIESTNP CGEQPLLPYE ACNLGSINLS NMLKYVDGKP EVDFAKLRTT VWKAVHFLDN VIDVNKYPLP EIDKMTRGTR KIGLGVMGWA DMLCKLNIPY NSQSSIDLAE KIMHFIQDES RKASMELAEK KGVFPYYDKS IYKNLGIRVR NATTTTIAPT GTLSIIAGVS SGIEPLFAIS YIRNVMDNDE LVEVNPVFKQ VAKEEGFYSD ELMRRIAKKG SIRGFDEIPE WIQDVFVTAH DISPDWHVRM QAAFQKYTDN AVSKTVNLRN EATRKDVADA FWLAYKTNCK GITIYRDGSR DLQVLNIGKV KGKEESVSKA REEGPAKPKE QIKPVSGIAP RPRSEIATGF TEKVKIGCGN LYITVNYDDY GICEVFTNTG RAGGCPSQSE ATARLVSIAL RSGVDYKYIV EQLKGIRCPS TIRQKGLKVL SCPDAIGRLI EKVAKLQNGQ KIMATEAHIT DEQRFQRPTA NTYYKFEDAS EEEEVDFRIA ELENDTEEND TENADTAVCP ECGRKVEHEG GCVVCRNCGY SKCG
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