| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3755 |
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| Symbol | |
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| ID | 4689486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 4001932 |
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| End bp | 4005486 |
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| Gene Length | 3555 bp |
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| Protein Length | 1184 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639836773 |
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| Product | ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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| Protein accession | YP_983972 |
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| Protein GI | 121606643 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR01443] intein C-terminal splicing region
[TIGR01445] intein N-terminal splicing region
[TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.561834 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGCG AACATTTCGG CCGGCCGCAA GACCTGACCG CCACCCAGCC CATCAGCCAT
GACGTGCTGA AGGAAAAGTA CCTCAAGCCC GGTGAGAGCG GCGTCGAAGA CGTGTACCGG
CGCGTGGCGC GGGCGCTGGC GTCGGTCGAG CTGCCCGCCG AGCGCGAAAA GCACGAGGCG
CTGTTCCTGG AGAATCTGCA CGCCGGCGCG ATTGGCGCGG GCCGCATCAT GAGCGCGGCG
GGCACGGCGA TTCAGGCCAC GCTGATTAAC TGTTTCGTGC AGCCGGTCGG CGACTGCATC
CAGGGCGTCG ATGACGGTGG CTACCCCGGC ATTTACGAAG CGCTGCGCGA GGCCGCCGAA
ACCATGCGGC GCGGCGGCGG CGTCGGCTAC GACTTCTCGC GCATCCGCCC GCGCGGCGCC
GAGGTCAAGG CCACCGCGTC GATGGCTTCC GGGCCATGCA GCTACATCAA CGTCTTCGAC
CAGTCGTGCT CGACGGTCGA GAGCGCCGGC GCGCGGCGCG GCGCGCAGAT GGGCGTGCTG
CGCATCGACC ACCCCGATGT GCACGAGTTC ATCACCGCCA AGCGCACGCC CGGCCGCTGG
AACAATTTCA ACGTGTCGGT CGGCATGTCG GACGGCTTCA TGCAGGCGCT GAACGACGAC
CAGCCGTGGG AGCTGGTGCA CAAGGCCAAG CCCGGCGCCG CGCTGATGGC CAAGGGCGCC
TTCCAGCGCG CCGACGGCCT GTGGGTCTAC CAGACCGTGG CGGCGCGCGA GATGTGGGAC
ACCGTGATGC GCTCGGCCTA CGACTTCGCC GAGCCCGGCA TCTTGTTTCT GGACAACATC
AATACGGACA ACAACCTGCG CTACTGCGAG GCGATTGCCG CGACCAATCC GTGCGTGACC
GCCGACACGC GACTGGCGAC GCAGCACGGC CTCGTGCCCA TCGGCTGGCT GCAGGCCAAC
GGCGGCGCGC TGGACTGCAC GGTGGACCGC CGCGCGCTGG GCGAGGATAG GCGCGGCACC
GTCACTCGGG CGGCCGTACC GGCATTTCTG AGCGCGGGGC AAGCCGAGGT CTTCAAGGTC
ACCACGGCCG AGGGCTACCA GATCAAGGCA ACGGCCTGGC ACGAGTTCTA CACGGCCCGA
GGCAAGCTCA AGCTGTCGGA GCTGAAAGCC GGTGACGAGT TGTGGGTGCA GTCGGGCAAA
GGCCAGTTCG GCGCCCAGGG CAGCGGGGCG CTGGGCCTGC TCATCGGGCT GATCACGGGC
GACGGGCACT TCACGAATCG CGGCAAGGAC GAGCAGGCGG CAGTCATCAG CCTGTGGGGC
GAAGAGCGCC AGCTCGCCGA TGACATTGCC GGTTCCGTCA ACGCGCTGAT CGCCGGCACG
TCGCTGGCAC CGCGCGACTA CCTCGTCAAG CCCGTCGCCG TTGCGGAGCG CAACATGGTC
TTCATCCGCT CGACCATGCT GGTCCGCGTG CTGGACGGTT ACGGTTTCAA TGGAGAGACC
AAGCTGGAGG TGCCCGAAGT GGTCTGGCGG GGCAGCGAAG CCTGCATGCG CGGCTATCTG
CAAGGCCTCT TCCAGACCGA CGGGACGGTC AACGTGTCAT CGAACAGCCA GAGCTGCTCG
GTGCGCTTGT CGTCCAGTCA CCGGCCGCTG CTGCAGGACG TGCAGGTGCT GCTGGCCAAC
TTCGGCGTGT TCTCGCGCAT CCACGAGCGG CGCGAAGCTG GCCCGCGCAG CTTGCCAGAT
GGCCAGGGCG GACAGCGCGA CTACCTCTGC CAGACCCAGC ACGAGCTGAT CGTCGACGGC
GAATCGCGCG AAGCCTTCAT GCGCGAGATC GGCTTCCTGC TTCCCGCCAA GCGCGAGAAG
TACGACGCCT GGGTCGCCGA CAAGGCACTC GTCAAGACCC AGCGCTTTGC CGCCACCATC
ACCGCCATCG AGCCCGCTGG CGTGGAGCCG GTCTATGACA CGACCCAGCC GGACGGCAAC
ACCGTCATCT TCAATGGCCT CGTCACCGGG CAATGTGGCG AGCAGCCACT TCCGCCCTAC
GGCTGCTGCG ACCTCGGCCC CATCATCCTG ACGCGCTTCG TGCGCCATCC GTTCGGCTTC
GGCGGCGAGC CTGAGTTCGA CTTCGAAGCC TTCGAGGCGT CCGTGGCGAC GCAGGTGCGC
GCGCTCGACA ACGTGCTCGA AGTGACCTTC TGGCCGCTGC CGCAGCAGCA GACCGAATCC
AGCGCCAAGC GCCGCATCGG CGTCGGCTTC ACCGGCCTGG GCAATGCGCT GGCCATGCTG
CGCCTGCGCT ACGACGCCCC CGAAGGCCGC GACATGGCAG CCCGCATTGC CGTGCGCATG
CGCGATGCCG CCTACGCCGC ATCAAGCGAG CTGGCGAAGG AAAAGGGCGC TTTCCCCAAG
TTCGACGCCA ACGGCTACCT GGCCACCGGC ACCTTTGCCA GCCGCCTGCC GGCCGCGTTG
CAGCAGGCGA TTCGCGCCCA TGGCATACGC AACAGCCACC TGCTGTCGAT TGCGCCCACC
GGCACGGTCA GCCTGGCCTT TGCCGACAAT GCCTCCAACG GCATCGAGCC GGCGTTTTCG
TGGATGTACA AGCGCAAAAA GCGCGAGTCC GACGGCAGCA CCACCGAATA CGCGGTCGAG
GACCACGCCT GGCGGCTGTA CCGCGAACTG GGCGGCGACG TGAACAAGCT GCCCGGCTAC
TTTGTCTCGG CGCTCGACAT GTCGGCGACC AGCCACATCG CCATGATGCA GGCGGTGCAG
CCCTTCATCG ACACGGCGAT TTCCAAGACC GTCAACGTGC CGGCCGACTA CCCCTACGGC
GACTTCAAGA GCCTCTACCA CCAGGCCTGG CGCGCCGGGC TCAAGGGCCT GGCGACCTAC
CGGCCCAACG CCATTTTGGG CGCGGTGCTC GAAACCCACG CGAGTCCCGA CGCCACGCCG
GCCGCAGCGG CGCCGGCGCC GATGGACCCG ATGCGCACGG TGATCGAAAG CCGGCCCAAG
GGCGCGCTGT CGGCGGTCGC CGAAAAGGTC GAATACTGGA CCCAGGAAGG CCACAAGACG
CTGTACATCG TGGTGTCGTT TTTGCCGGTG CCCAGTGCCA GCGGCTCGGG CACGGTCGAG
CGCGCCATCG AGTTCTTCAT GCCGGTCGGG CAGAGCGGCG AGTCGCAGCA ATGGATCACC
TCCAGCATGC GCATGCTGTC GCTGGCCGCG CGCGGCGGCT TCCTGGAGCG CGCGCTCAGC
GACATGCGCA AGGTCGCCTG GGACCGTGGC CCGGTGCGGC TGGGCACCTA CGAAAAAGCC
GACGGCACGC GCGTGCCGCT GTGGCACGAC TCCGAGGTGG CGGCGATTGC CTACGCGGTG
CAAAATATCA TCGCCCGGCG CGCGGCCCAG TCGGCCCTGA GCCTGGCGCC GGCCGAGCCC
GTGCAGGTCG CCTCCAGCCT GGCGCCGCCG GTCATGGCCG GCAAGAAATG CAGCGAATGC
GGCGCCCATG CGGTGATCCG CAAGGACGGC TGCGATTACT GCACCCAGTG CGGCCACCTG
GGCACCTGCG GGTGA
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| Protein sequence | MKREHFGRPQ DLTATQPISH DVLKEKYLKP GESGVEDVYR RVARALASVE LPAEREKHEA
LFLENLHAGA IGAGRIMSAA GTAIQATLIN CFVQPVGDCI QGVDDGGYPG IYEALREAAE
TMRRGGGVGY DFSRIRPRGA EVKATASMAS GPCSYINVFD QSCSTVESAG ARRGAQMGVL
RIDHPDVHEF ITAKRTPGRW NNFNVSVGMS DGFMQALNDD QPWELVHKAK PGAALMAKGA
FQRADGLWVY QTVAAREMWD TVMRSAYDFA EPGILFLDNI NTDNNLRYCE AIAATNPCVT
ADTRLATQHG LVPIGWLQAN GGALDCTVDR RALGEDRRGT VTRAAVPAFL SAGQAEVFKV
TTAEGYQIKA TAWHEFYTAR GKLKLSELKA GDELWVQSGK GQFGAQGSGA LGLLIGLITG
DGHFTNRGKD EQAAVISLWG EERQLADDIA GSVNALIAGT SLAPRDYLVK PVAVAERNMV
FIRSTMLVRV LDGYGFNGET KLEVPEVVWR GSEACMRGYL QGLFQTDGTV NVSSNSQSCS
VRLSSSHRPL LQDVQVLLAN FGVFSRIHER REAGPRSLPD GQGGQRDYLC QTQHELIVDG
ESREAFMREI GFLLPAKREK YDAWVADKAL VKTQRFAATI TAIEPAGVEP VYDTTQPDGN
TVIFNGLVTG QCGEQPLPPY GCCDLGPIIL TRFVRHPFGF GGEPEFDFEA FEASVATQVR
ALDNVLEVTF WPLPQQQTES SAKRRIGVGF TGLGNALAML RLRYDAPEGR DMAARIAVRM
RDAAYAASSE LAKEKGAFPK FDANGYLATG TFASRLPAAL QQAIRAHGIR NSHLLSIAPT
GTVSLAFADN ASNGIEPAFS WMYKRKKRES DGSTTEYAVE DHAWRLYREL GGDVNKLPGY
FVSALDMSAT SHIAMMQAVQ PFIDTAISKT VNVPADYPYG DFKSLYHQAW RAGLKGLATY
RPNAILGAVL ETHASPDATP AAAAPAPMDP MRTVIESRPK GALSAVAEKV EYWTQEGHKT
LYIVVSFLPV PSASGSGTVE RAIEFFMPVG QSGESQQWIT SSMRMLSLAA RGGFLERALS
DMRKVAWDRG PVRLGTYEKA DGTRVPLWHD SEVAAIAYAV QNIIARRAAQ SALSLAPAEP
VQVASSLAPP VMAGKKCSEC GAHAVIRKDG CDYCTQCGHL GTCG
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