16 homologs were found in PanDaTox collection
for query gene Tbd_2502 on replicon NC_007404
Organism: Thiobacillus denitrificans ATCC 25259



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007404  Tbd_2502  hypothetical protein  100 
 
 
154 aa  311  1.9999999999999998e-84  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_3649  hypothetical protein  36.17 
 
 
161 aa  77.8  0.00000000000005  Thauera sp. MZ1T  Bacteria  normal  0.197087  n/a   
 
 
-
 
NC_007947  Mfla_2448  hypothetical protein  36.2 
 
 
160 aa  75.5  0.0000000000003  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.0000154808  normal  0.769134 
 
 
-
 
NC_007298  Daro_3762  hypothetical protein  38.52 
 
 
148 aa  72.8  0.000000000001  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.118214 
 
 
-
 
NC_003295  RSc1259  putative signal peptide protein  33.56 
 
 
170 aa  71.2  0.000000000004  Ralstonia solanacearum GMI1000  Bacteria  normal  0.852163  normal  0.617391 
 
 
-
 
NC_007973  Rmet_2061  putative signal peptide protein  34.9 
 
 
157 aa  68.6  0.00000000003  Cupriavidus metallidurans CH34  Bacteria  hitchhiker  0.00788966  normal 
 
 
-
 
NC_010682  Rpic_1087  conserved hypothetical signal peptide protein  33.33 
 
 
174 aa  65.1  0.0000000004  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_1180  putative signal peptide protein  33.33 
 
 
174 aa  64.7  0.0000000005  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A2056  putative signal peptide protein  31.72 
 
 
188 aa  58.9  0.00000002  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2980  putative signal peptide protein  29.75 
 
 
180 aa  46.6  0.0001  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_1443  putative signal peptide protein  30.66 
 
 
172 aa  47  0.0001  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_0501  hypothetical protein  41.54 
 
 
171 aa  46.2  0.0002  Saccharophagus degradans 2-40  Bacteria  hitchhiker  0.0000000510375  normal 
 
 
-
 
NC_010002  Daci_5001  putative signal peptide protein  32.39 
 
 
167 aa  46.2  0.0002  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_009783  VIBHAR_00586  hypothetical protein  46.3 
 
 
193 aa  44.3  0.0006  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008825  Mpe_A2075  putative signal peptide protein  27.56 
 
 
171 aa  42  0.003  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.865285 
 
 
-
 
NC_013456  VEA_001906  hypothetical protein  44.44 
 
 
193 aa  42  0.003  Vibrio sp. Ex25  Bacteria  normal  0.661466  n/a   
 
 
-
 
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