Gene Rfer_2980 details

Gene Information

• Locus tag: Rfer_2980
• ID: 3960611
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: +
• Start bp: 3287201
• End bp: 3287743
• Gene Length: 543 bp
• Protein Length: 180 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637917800
• Product: putative signal peptide protein
• Protein accession: YP_524222
• Protein GI: 89901751

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCATTTTT TCCAGCGTGG AAAATTTATG AACCATGCTT TATTGATTTC CCTGGCGGCT 
TGCTTGTTGG TGGGCAACAG CTTTGCCCAG GAGCGAATTT ACCGCTGTGG CAACGAATAC 
ACCAACACCG TGCCCAGTGC CCAGACAAAA GGCTGCAAGC TCATGGAAGG CGGCAACGTG 
ACCGTGGTGC AGGGCACCCG TCCCCATGCC GCCCAGCAGA AGCCGGCAGC GGCAGCGCCG 
CAAGCTGCGT CTGCGCCCGG GCAGCGGGTC GACGCCGCAG ATCAGAAGTC GCGTGACTCG 
GATGCGCGCC AGATTCTCGA ACTGGAGCTG AAGAAAGCCC AGGCGCGCCA GGAAGAGTTG 
CTGCGGGAAT ACAACAACGG CGAGCCGGAA AAGCAGGGCA GCGAGGCGCG CAATTACCAG 
AAATACCTGG ACCGGGTGGC GGAACTCAAG GCCAGTCTGG CCCGCAACGA GAGCGACATG 
GCCGGCATTC GGCGTGAACT CGGGCGACTC GGCGTTCCGG CGGCGGCACC TGGGGCTAAG 
TAA 

 

Protein sequence

MHFFQRGKFM NHALLISLAA CLLVGNSFAQ ERIYRCGNEY TNTVPSAQTK GCKLMEGGNV 
TVVQGTRPHA AQQKPAAAAP QAASAPGQRV DAADQKSRDS DARQILELEL KKAQARQEEL 
LREYNNGEPE KQGSEARNYQ KYLDRVAELK ASLARNESDM AGIRRELGRL GVPAAAPGAK