Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1259 |
Symbol | |
ID | 1220082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1338350 |
End bp | 1338862 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637237636 |
Product | putative signal peptide protein |
Protein accession | NP_519380 |
Protein GI | 17545978 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.852163 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.617391 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCCGTC CTTCTTCCCG CATCGCATCC GGGCTGCTTG CCGCTACCGC GGCGCTTGCT GCGCTGTCCG TGCAGGTTCC CGCGCATGCG GATGATGTCT ATCTGTGCAC CGGCCCGAAC GGCGTGCCGG AGTACCGCAA CAGCGGCAAC GTGAAGGGCT GCCGCAAGCT GTCGCTGCCC GACGTGGTCA CGGTGCCGGG CACGCGCAGT CCGCGCAGCG GGGGGGCGGC GGCGCCGGCT GAGTCGAGCG GCAGCTTCCC GCGCGTCGAC AGCGCGACGC AGAAGAGCCG TGACAGCGAA CGCCGCCGCG TGCTGGAGGC CGAGTTGTCG GAAGAGGAGC GCAAGCTCCA GGCGTTGCAG GCCGAGTACA ACAACGGCCA GCCCGAGCGC CAGGGCAACG AACGTAACTA TCAGAAATAT CTCGACCGCA CCGCGCAGCT GAAGAGCGAC ATCGAGCGTA GCCAGGCCAA TGTCGAATCC ATCCGCCGGG AGCTGTCCAA CCTGAAGGAG TAG
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Protein sequence | MFRPSSRIAS GLLAATAALA ALSVQVPAHA DDVYLCTGPN GVPEYRNSGN VKGCRKLSLP DVVTVPGTRS PRSGGAAAPA ESSGSFPRVD SATQKSRDSE RRRVLEAELS EEERKLQALQ AEYNNGQPER QGNERNYQKY LDRTAQLKSD IERSQANVES IRRELSNLKE
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