Gene RSc1259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1259 
Symbol 
ID1220082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1338350 
End bp1338862 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content67% 
IMG OID637237636 
Productputative signal peptide protein 
Protein accessionNP_519380 
Protein GI17545978 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.852163 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.617391 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCGTC CTTCTTCCCG CATCGCATCC GGGCTGCTTG CCGCTACCGC GGCGCTTGCT 
GCGCTGTCCG TGCAGGTTCC CGCGCATGCG GATGATGTCT ATCTGTGCAC CGGCCCGAAC
GGCGTGCCGG AGTACCGCAA CAGCGGCAAC GTGAAGGGCT GCCGCAAGCT GTCGCTGCCC
GACGTGGTCA CGGTGCCGGG CACGCGCAGT CCGCGCAGCG GGGGGGCGGC GGCGCCGGCT
GAGTCGAGCG GCAGCTTCCC GCGCGTCGAC AGCGCGACGC AGAAGAGCCG TGACAGCGAA
CGCCGCCGCG TGCTGGAGGC CGAGTTGTCG GAAGAGGAGC GCAAGCTCCA GGCGTTGCAG
GCCGAGTACA ACAACGGCCA GCCCGAGCGC CAGGGCAACG AACGTAACTA TCAGAAATAT
CTCGACCGCA CCGCGCAGCT GAAGAGCGAC ATCGAGCGTA GCCAGGCCAA TGTCGAATCC
ATCCGCCGGG AGCTGTCCAA CCTGAAGGAG TAG
 
Protein sequence
MFRPSSRIAS GLLAATAALA ALSVQVPAHA DDVYLCTGPN GVPEYRNSGN VKGCRKLSLP 
DVVTVPGTRS PRSGGAAAPA ESSGSFPRVD SATQKSRDSE RRRVLEAELS EEERKLQALQ
AEYNNGQPER QGNERNYQKY LDRTAQLKSD IERSQANVES IRRELSNLKE