Gene Daci_5001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5001 
Symbol 
ID5750612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5536953 
End bp5537456 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content65% 
IMG OID641300125 
Productputative signal peptide protein 
Protein accessionYP_001566015 
Protein GI160900433 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAC TGTTTGTGTC ACTGCTGCTG CCCCTGCTGT CGGTGGGAGC CTGGTCCCAG 
GACGTGATCT ACCGCTGCGG CAACGAGTAC ACCAACAACG TCAGCCAGGC CAAGGCCAAG
GACTGCAAGC CGGTGGATGG CGGGCATGTG ACGGTGATCC ATGGCGGCAG CAAGCCGGCG
GCCTCGGGCG GCAGCCAGGC ACCGCGCACC TCCGCCACTC CGGCCGCAGG ATCGCCCGCT
CCGGCCAAGG TCAATAGCAG CGCCCAGAAG GCCCGCGACT CCGACGCGCG GACCATTCTG
GAAAGCGAGC TGGCCCGCGC CCAGGAGAAG CTGACACAGC TGCGTCAGGA GTACAACGAT
GGCAATCCCC AGCGCACCGC ATTGGAGTTG CGCAATCCCC AGGGCTATCT GGAACGTGTC
GAGCAGCTCA AGAGCAGCAT CTCGCGGCAG GAAGGCGATG TCGCCGGCAT CCGTCGTGAG
CTGGATCGAC TTCCCAAGAA CTGA
 
Protein sequence
MKKLFVSLLL PLLSVGAWSQ DVIYRCGNEY TNNVSQAKAK DCKPVDGGHV TVIHGGSKPA 
ASGGSQAPRT SATPAAGSPA PAKVNSSAQK ARDSDARTIL ESELARAQEK LTQLRQEYND
GNPQRTALEL RNPQGYLERV EQLKSSISRQ EGDVAGIRRE LDRLPKN