Gene Rpic_1087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1087 
Symbol 
ID6287479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1158786 
End bp1159310 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content65% 
IMG OID642624660 
Productconserved hypothetical signal peptide protein 
Protein accessionYP_001898667 
Protein GI187928180 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCGTC CTTCCCCACG CATCGCATCC GGGCTGCTTG CCGCCGCTGC GGCGGTGTTT 
GCCACGCTGT CCGTGCAGGC TCCCGCGTAC GCCGATGACG TCTATCTGTG CACCGGTCCG
AACGGCGTGC CGGAGTACCG CAACAGCGGC AACGTGAAGG GCTGCAAGAA GTTGACGCTG
CCCGATGTGG TGACCGTGCC CGGCACGCGA AGCCCGCGCA GTGCGGGTGC TGCACCCGCG
CCGGCGCAAA ACAATGCAGG CGGTGGCTTC CCCCGCGTGG ACAACGCCAC GCAGAAGGCG
CGTGACGGCG AACGCCGCCA GGTGCTGGAA GCCGAGCTGG CAGACGAGGA GCGCAAGCTC
CAGGCTTTGA AGACCGAATA CAACAACGGT CAGCCCGAGC GCCAGGGCAA CGAACGTAAC
TATCAAAAGT ATCTGGACCG CACCGCGCAG TTGAAGGGCG ACATCGAGCG CAGCCAGGCC
AATGTCGATT CCATCCGCCG GGAGCTGGGC AATCTCAAGG ACTAG
 
Protein sequence
MFRPSPRIAS GLLAAAAAVF ATLSVQAPAY ADDVYLCTGP NGVPEYRNSG NVKGCKKLTL 
PDVVTVPGTR SPRSAGAAPA PAQNNAGGGF PRVDNATQKA RDGERRQVLE AELADEERKL
QALKTEYNNG QPERQGNERN YQKYLDRTAQ LKGDIERSQA NVDSIRRELG NLKD