13 homologs were found in PanDaTox collection
for query gene Swoo_3790 on replicon NC_010506
Organism: Shewanella woodyi ATCC 51908



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010506  Swoo_3790  PepSY-associated TM helix domain-containing protein  100 
 
 		 265 aa  535  1e-151  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.000212157  decreased coverage  0.000000557586 
 
 
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NC_009831  Ssed_3891  PepSY-associated TM helix domain-containing protein  66.53 
 
 		 281 aa  341  9e-93  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0337067  hitchhiker  0.00968624 
 
 
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NC_009901  Spea_0709  PepSY-associated TM helix domain-containing protein  52.45 
 
 		 262 aa  288  7e-77  Shewanella pealeana ATCC 700345  Bacteria  normal  0.180052  n/a   
 
 
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NC_009092  Shew_3122  PepSY-associated TM helix domain-containing protein  50.56 
 
 		 266 aa  270  1e-71  Shewanella loihica PV-4  Bacteria  normal  0.325368  unclonable  0.00000468189 
 
 
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NC_008345  Sfri_4033  PepSY-associated TM helix domain-containing protein  46.48 
 
 		 253 aa  226  3e-58  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
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NC_009052  Sbal_2016  PepSY-associated TM helix domain-containing protein  42.91 
 
 		 266 aa  217  2e-55  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
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NC_007954  Sden_0640  PepSY-associated TM helix  40.74 
 
 		 269 aa  213  2.9999999999999995e-54  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.000432341  n/a   
 
 
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NC_008700  Sama_0587  PepSY-associated TM helix  41.83 
 
 		 252 aa  212  3.9999999999999995e-54  Shewanella amazonensis SB2B  Bacteria  normal  0.191213  decreased coverage  0.000115238 
 
 
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NC_003910  CPS_4600  hypothetical protein  33.47 
 
 		 259 aa  162  5.0000000000000005e-39  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
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NC_007912  Sde_2435  hypothetical protein  30.61 
 
 		 261 aa  128  1.0000000000000001e-28  Saccharophagus degradans 2-40  Bacteria  normal  0.0705748  normal  0.0774644 
 
 
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NC_007520  Tcr_1317  PepSY-associated TM helix  27.78 
 
 		 253 aa  105  6e-22  Thiomicrospira crunogena XCL-2  Bacteria  hitchhiker  0.00187914  n/a   
 
 
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NC_007964  Nham_3633  PepSY-associated TM helix  30.56 
 
 		 213 aa  44.7  0.002  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
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NC_013422  Hneap_0578  flavodoxin/nitric oxide synthase  40.82 
 
 		 844 aa  43.1  0.005  Halothiobacillus neapolitanus c2  Bacteria  normal  0.142303  n/a   
 
 
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