Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2435 |
Symbol | |
ID | 3966655 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 3081135 |
End bp | 3081920 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637921526 |
Product | hypothetical protein |
Protein accession | YP_527907 |
Protein GI | 90022080 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0705748 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0774644 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAAAG CAGAAACAAG AAAACTCTTC ACTACATGGC ATAAAAAGCT GGGAATCTTC AGCGCCGCCT TTCTTATTTT CCTCTCTATA ACGGGCGTAT TGCTTAATCA TGCGCACGAC TTAAAGCTAG ATTCAAACGA CGTAAACGCC CCTTTTTTGT TAGAAATCTA TGGGGTGGAG TTGCCAGAGG TTACGGCCGT CGAACTTGCT CATAACTGGT TATCTCATCA AGAGGGGGTT TTATACTTTG GCTATGATGA GTTTGCCGAA TGCAAAGGCG AGTTTTTAGG CGCTGTCTCG CTACCGGAAT ACTGGATAGC CGTGTGTGGT TTGGAAATAC AGCTGTATAC CTATGCGAAT CAGCTAGTGG AGCGAGCAGG CCCGATGTAC GGTTTGCCTC AACCCATTGT GCAAGTTGGT AAATGCTATA ACAGCCTGTG TGTTTCCGAC GGCGTCCAAA GCTATCAATT AAATGCCGAT GAAATGACGT GGGCGCAAGT GCAGTACCCC GTTGGAAGAG TATTGCAGTG GGTTGAGCTA ACCGAACCGC CACTGCATGT GCTGGCGCAA GTACAAAGCA ATCGCCATGG TGGAGAGATT ACCTGGGAGC GAGTGGTAAT GGATTTGCAC GCTGGAAGGT TCTTGGGGGC GATAGGGCCG TTGTTTATGG ATGCGGTGGC GCTACTATTT ATTGTGTTAG CGGTTACGGG CATTATATTG TGGATGCAAA AAAACAAGCG TTCTGGGCAA CGAAGAGAAA AGGGCAGGCG TAAGTTAAAA GAATAG
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Protein sequence | MAKAETRKLF TTWHKKLGIF SAAFLIFLSI TGVLLNHAHD LKLDSNDVNA PFLLEIYGVE LPEVTAVELA HNWLSHQEGV LYFGYDEFAE CKGEFLGAVS LPEYWIAVCG LEIQLYTYAN QLVERAGPMY GLPQPIVQVG KCYNSLCVSD GVQSYQLNAD EMTWAQVQYP VGRVLQWVEL TEPPLHVLAQ VQSNRHGGEI TWERVVMDLH AGRFLGAIGP LFMDAVALLF IVLAVTGIIL WMQKNKRSGQ RREKGRRKLK E
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