Gene Sde_2435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2435 
Symbol 
ID3966655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3081135 
End bp3081920 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content48% 
IMG OID637921526 
Producthypothetical protein 
Protein accessionYP_527907 
Protein GI90022080 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0705748 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0774644 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAAG CAGAAACAAG AAAACTCTTC ACTACATGGC ATAAAAAGCT GGGAATCTTC 
AGCGCCGCCT TTCTTATTTT CCTCTCTATA ACGGGCGTAT TGCTTAATCA TGCGCACGAC
TTAAAGCTAG ATTCAAACGA CGTAAACGCC CCTTTTTTGT TAGAAATCTA TGGGGTGGAG
TTGCCAGAGG TTACGGCCGT CGAACTTGCT CATAACTGGT TATCTCATCA AGAGGGGGTT
TTATACTTTG GCTATGATGA GTTTGCCGAA TGCAAAGGCG AGTTTTTAGG CGCTGTCTCG
CTACCGGAAT ACTGGATAGC CGTGTGTGGT TTGGAAATAC AGCTGTATAC CTATGCGAAT
CAGCTAGTGG AGCGAGCAGG CCCGATGTAC GGTTTGCCTC AACCCATTGT GCAAGTTGGT
AAATGCTATA ACAGCCTGTG TGTTTCCGAC GGCGTCCAAA GCTATCAATT AAATGCCGAT
GAAATGACGT GGGCGCAAGT GCAGTACCCC GTTGGAAGAG TATTGCAGTG GGTTGAGCTA
ACCGAACCGC CACTGCATGT GCTGGCGCAA GTACAAAGCA ATCGCCATGG TGGAGAGATT
ACCTGGGAGC GAGTGGTAAT GGATTTGCAC GCTGGAAGGT TCTTGGGGGC GATAGGGCCG
TTGTTTATGG ATGCGGTGGC GCTACTATTT ATTGTGTTAG CGGTTACGGG CATTATATTG
TGGATGCAAA AAAACAAGCG TTCTGGGCAA CGAAGAGAAA AGGGCAGGCG TAAGTTAAAA
GAATAG
 
Protein sequence
MAKAETRKLF TTWHKKLGIF SAAFLIFLSI TGVLLNHAHD LKLDSNDVNA PFLLEIYGVE 
LPEVTAVELA HNWLSHQEGV LYFGYDEFAE CKGEFLGAVS LPEYWIAVCG LEIQLYTYAN
QLVERAGPMY GLPQPIVQVG KCYNSLCVSD GVQSYQLNAD EMTWAQVQYP VGRVLQWVEL
TEPPLHVLAQ VQSNRHGGEI TWERVVMDLH AGRFLGAIGP LFMDAVALLF IVLAVTGIIL
WMQKNKRSGQ RREKGRRKLK E