11 homologs were found in PanDaTox collection
for query gene Sama_0587 on replicon NC_008700
Organism: Shewanella amazonensis SB2B



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008700  Sama_0587  PepSY-associated TM helix  100 
 
 		 252 aa  508  1e-143  Shewanella amazonensis SB2B  Bacteria  normal  0.191213  decreased coverage  0.000115238 
 
 
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NC_008345  Sfri_4033  PepSY-associated TM helix domain-containing protein  52.89 
 
 		 253 aa  249  4e-65  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_009052  Sbal_2016  PepSY-associated TM helix domain-containing protein  45.11 
 
 		 266 aa  229  3e-59  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_009092  Shew_3122  PepSY-associated TM helix domain-containing protein  44.32 
 
 		 266 aa  214  9.999999999999999e-55  Shewanella loihica PV-4  Bacteria  normal  0.325368  unclonable  0.00000468189 
 
 
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NC_009901  Spea_0709  PepSY-associated TM helix domain-containing protein  44.4 
 
 		 262 aa  213  1.9999999999999998e-54  Shewanella pealeana ATCC 700345  Bacteria  normal  0.180052  n/a   
 
 
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NC_010506  Swoo_3790  PepSY-associated TM helix domain-containing protein  41.83 
 
 		 265 aa  212  3.9999999999999995e-54  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.000212157  decreased coverage  0.000000557586 
 
 
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NC_007954  Sden_0640  PepSY-associated TM helix  43.48 
 
 		 269 aa  201  7e-51  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.000432341  n/a   
 
 
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NC_009831  Ssed_3891  PepSY-associated TM helix domain-containing protein  39.36 
 
 		 281 aa  190  2e-47  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0337067  hitchhiker  0.00968624 
 
 
-
 
NC_003910  CPS_4600  hypothetical protein  32.39 
 
 		 259 aa  150  2e-35  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_007912  Sde_2435  hypothetical protein  31.58 
 
 		 261 aa  111  1.0000000000000001e-23  Saccharophagus degradans 2-40  Bacteria  normal  0.0705748  normal  0.0774644 
 
 
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NC_007520  Tcr_1317  PepSY-associated TM helix  26.14 
 
 		 253 aa  77.4  0.0000000000002  Thiomicrospira crunogena XCL-2  Bacteria  hitchhiker  0.00187914  n/a   
 
 
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