11 homologs were found in PanDaTox collection
for query gene Tcr_1317 on replicon NC_007520
Organism: Thiomicrospira crunogena XCL-2



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007520  Tcr_1317  PepSY-associated TM helix  100 
 
 		 253 aa  507  1e-143  Thiomicrospira crunogena XCL-2  Bacteria  hitchhiker  0.00187914  n/a   
 
 
-
 
NC_010506  Swoo_3790  PepSY-associated TM helix domain-containing protein  27.78 
 
 		 265 aa  105  5e-22  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.000212157  decreased coverage  0.000000557586 
 
 
-
 
NC_009831  Ssed_3891  PepSY-associated TM helix domain-containing protein  27.71 
 
 		 281 aa  97.1  3e-19  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0337067  hitchhiker  0.00968624 
 
 
-
 
NC_009901  Spea_0709  PepSY-associated TM helix domain-containing protein  26.64 
 
 		 262 aa  96.7  4e-19  Shewanella pealeana ATCC 700345  Bacteria  normal  0.180052  n/a   
 
 
-
 
NC_007912  Sde_2435  hypothetical protein  26.34 
 
 		 261 aa  85.9  5e-16  Saccharophagus degradans 2-40  Bacteria  normal  0.0705748  normal  0.0774644 
 
 
-
 
NC_003910  CPS_4600  hypothetical protein  26.74 
 
 		 259 aa  84.3  0.000000000000001  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_008700  Sama_0587  PepSY-associated TM helix  26.14 
 
 		 252 aa  77.4  0.0000000000002  Shewanella amazonensis SB2B  Bacteria  normal  0.191213  decreased coverage  0.000115238 
 
 
-
 
NC_007954  Sden_0640  PepSY-associated TM helix  24.7 
 
 		 269 aa  74.3  0.000000000002  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.000432341  n/a   
 
 
-
 
NC_009092  Shew_3122  PepSY-associated TM helix domain-containing protein  25.4 
 
 		 266 aa  72.8  0.000000000005  Shewanella loihica PV-4  Bacteria  normal  0.325368  unclonable  0.00000468189 
 
 
-
 
NC_009052  Sbal_2016  PepSY-associated TM helix domain-containing protein  24.9 
 
 		 266 aa  71.2  0.00000000001  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_008345  Sfri_4033  PepSY-associated TM helix domain-containing protein  25.7 
 
 		 253 aa  65.9  0.0000000006  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>