| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0587 |
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| Symbol | |
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| ID | 4602840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 733548 |
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| End bp | 734306 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639779922 |
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| Product | PepSY-associated TM helix |
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| Protein accession | YP_926465 |
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| Protein GI | 119773725 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.191213 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000115238 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACTCGAC GCCCTTCAAA TACAGCCGGT AAACAACTCG GCCACCGGCT GCGCAAACAA
ATCCGCCCCT GGCACAGACG CATCGGCATT ATCGGTGGCC TGTTTTTGTT ATTTCTGACA
GTAACCGGCG TACTGATAAA CCACGCCGAC GACGCAGGGC TTGGACACGC CAAGGTGCGT
TTGCCCTGGT TATTGGATTA TTACGGTATC CAGCTCCCTT CCCACAGCGC GCAATTTGGC
GACTATGGCA TCACGGATAA TTTGCTGTGG CACCAAGGCA CTATGGTGCT GGAAGCCAAA
CACTCCCTCA TCGCCGCAAC CCAATGGCGC AATCAAACCA TCGCCATCGA TGCCGAAAAC
CTGTATCTGC TCAACGCTGA TGGCCAGTTG GTAGAAACCC AGAATAAAGC CACGGGGCTA
CCGTCCCCCC TCAAGGCCAT GGCCATCGAA GGAGAATCTC ATTTGTGGCT GAGCGGCGAC
AATGGGCAAT ATCTCGCGGA TGAAGATCTG ATTGAGTGGC AACCCGCCAC CTCATTTGCA
CCATTGCATT GGCTTGAAGG CGAGGCGGCT GAACAACAGT TACTGGAAGA TGCCCGCAGC
GCACACCTGC ACTGGGAACG GGTATTGCTC GACCTGCATG CAGGCCGGAT ATTCGGTCAA
TGGGGCGTCT GGCTTTGGGA TCTGCTCGCC CTTGGCTTTG TATTTTTGTC TTTGAGCGGT
CTCTACATCT GGATAAGCCA GCAACCCAAA CGCAAATAA
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| Protein sequence | MTRRPSNTAG KQLGHRLRKQ IRPWHRRIGI IGGLFLLFLT VTGVLINHAD DAGLGHAKVR
LPWLLDYYGI QLPSHSAQFG DYGITDNLLW HQGTMVLEAK HSLIAATQWR NQTIAIDAEN
LYLLNADGQL VETQNKATGL PSPLKAMAIE GESHLWLSGD NGQYLADEDL IEWQPATSFA
PLHWLEGEAA EQQLLEDARS AHLHWERVLL DLHAGRIFGQ WGVWLWDLLA LGFVFLSLSG
LYIWISQQPK RK
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