| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3122 |
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| Symbol | |
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| ID | 4922085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3709997 |
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| End bp | 3710797 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640164732 |
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| Product | PepSY-associated TM helix domain-containing protein |
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| Protein accession | YP_001095247 |
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| Protein GI | 127514050 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3295] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.325368 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000468189 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGACCAATA AGCCCCGCCA TCCCCATCGT AAACCCCTGT GGCAGAAACT CGCCAAGATC
TTCCGTCCCT GGCACAGACG CCTAGGGATC GCCAGCGCAC TCCTGGTGGT CATGGTTGCC
GTCAGCGGCG TCTTGATCAA CCACAGCAAC GACTTCAAGC TAGATACCGC CCACGTGCAT
CAGGGCTGGC TGCTGGATCA CTATGGCATC AAGGCCCCTG GCCAGGTCGC CATCTATGCC
AGCGAGCCGC TACTGGCCAC CAGCGATAAC CTGCTCTGGC TAAAGGACAA GCCGGTCCTG
GAGGCTCAGG GGCCGCTGCT TGGCGCCCTC GCCTATGGCG AGCACTATGT GGCTATCGAC
GCCCAGCACC TCTACCTACT AGACCGAGAT GGCGCCCTGC TGGAGCAGCA GAGCCGCGCC
ACCGGCCTGC CCCAAGACCT GCGCGCCCTG GCGCTGTTAC ACACGGGCGA CGCTGGGCAG
CTCTGGCTAA ATACGGCGTC CGGCAGTTAT CTTAGCGATA GCGATCTCAT CGAGTGGCAA
GAAGCGAAGC CTCTGGTGGC GCTTGACTGG CAGACCCCGC TTGCGGACGC CAGCAGTGAG
GCGATTAGTA AAGAATTGTC ACTCAAGGCA CGCGCCATGC ACCTCAGTTG GGAGCGCGTG
CTGCTGGACC TGCACAGCGG CCGTATCGTC GGCCTGCCCG GCTCGCTGAT GATGGATCTG
GTGGCGCTAT GCCTCATCTT CATGGCGATC TCCGGCCTCT ATCTGTGGCA GCAGGCCAAG
CCCCGCAAGC GCAAGGCATA A
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| Protein sequence | MTNKPRHPHR KPLWQKLAKI FRPWHRRLGI ASALLVVMVA VSGVLINHSN DFKLDTAHVH
QGWLLDHYGI KAPGQVAIYA SEPLLATSDN LLWLKDKPVL EAQGPLLGAL AYGEHYVAID
AQHLYLLDRD GALLEQQSRA TGLPQDLRAL ALLHTGDAGQ LWLNTASGSY LSDSDLIEWQ
EAKPLVALDW QTPLADASSE AISKELSLKA RAMHLSWERV LLDLHSGRIV GLPGSLMMDL
VALCLIFMAI SGLYLWQQAK PRKRKA
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