12 homologs were found in PanDaTox collection
for query gene Ssed_3891 on replicon NC_009831
Organism: Shewanella sediminis HAW-EB3



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009831  Ssed_3891  PepSY-associated TM helix domain-containing protein  100 
 
 		 281 aa  573  1.0000000000000001e-163  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0337067  hitchhiker  0.00968624 
 
 
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NC_010506  Swoo_3790  PepSY-associated TM helix domain-containing protein  63.57 
 
 		 265 aa  360  1e-98  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.000212157  decreased coverage  0.000000557586 
 
 
-
 
NC_009901  Spea_0709  PepSY-associated TM helix domain-containing protein  52.04 
 
 		 262 aa  300  1e-80  Shewanella pealeana ATCC 700345  Bacteria  normal  0.180052  n/a   
 
 
-
 
NC_009092  Shew_3122  PepSY-associated TM helix domain-containing protein  48.53 
 
 		 266 aa  271  6e-72  Shewanella loihica PV-4  Bacteria  normal  0.325368  unclonable  0.00000468189 
 
 
-
 
NC_007954  Sden_0640  PepSY-associated TM helix  43.87 
 
 		 269 aa  247  2e-64  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.000432341  n/a   
 
 
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NC_008345  Sfri_4033  PepSY-associated TM helix domain-containing protein  44.57 
 
 		 253 aa  224  1e-57  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
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NC_009052  Sbal_2016  PepSY-associated TM helix domain-containing protein  39.57 
 
 		 266 aa  218  1e-55  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_008700  Sama_0587  PepSY-associated TM helix  39.53 
 
 		 252 aa  200  1.9999999999999998e-50  Shewanella amazonensis SB2B  Bacteria  normal  0.191213  decreased coverage  0.000115238 
 
 
-
 
NC_003910  CPS_4600  hypothetical protein  32.95 
 
 		 259 aa  161  9e-39  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_007912  Sde_2435  hypothetical protein  28.14 
 
 		 261 aa  134  1.9999999999999998e-30  Saccharophagus degradans 2-40  Bacteria  normal  0.0705748  normal  0.0774644 
 
 
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NC_007520  Tcr_1317  PepSY-associated TM helix  27.71 
 
 		 253 aa  97.1  3e-19  Thiomicrospira crunogena XCL-2  Bacteria  hitchhiker  0.00187914  n/a   
 
 
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NC_013422  Hneap_0578  flavodoxin/nitric oxide synthase  35.29 
 
 		 844 aa  44.3  0.002  Halothiobacillus neapolitanus c2  Bacteria  normal  0.142303  n/a   
 
 
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