| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3790 |
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| Symbol | |
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| ID | 6118139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4625809 |
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| End bp | 4626606 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641635353 |
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| Product | PepSY-associated TM helix domain-containing protein |
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| Protein accession | YP_001762144 |
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| Protein GI | 170728118 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3295] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000212157 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000557586 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGACCCGTA AGCATCATCT ATCCGGTAGA AATAGCACAA GCTTAATGCT CAAAAGACAA
GTCCGTCCCT GGCACAGATG GCTAGGAATA TTCAGTGCGG TTTTTGTCTT ACTGATCGCT
ATATCTGGCG TATTAATCAA CCACAGTAAC CAGCTATCTA TCGACAGCGC CCATGTAAAA
CAGGCATGGT TACTGGACTA TTACGGCATC AAGACACCAT CTAATATCCA CATTTACCAA
ACAAGTCCAC TGCTTGCCAA CTCGGACAAT CTAGTATGGG TAGATAAACA CCTTGCATTG
GAAGCAGACT CCGCCATTCG TGGCATCGTT CCCTTCGACG ACATGCTCAT CGCTATCGAC
AATAGCAATC TATACCTTAT CTCCAATGAA GGAGTGCTGC TTGAGAAACA AGATATCACC
ACAGGACTCC CCTCAGGACT TACCGCTATC GCCAATGATG GACAGATATG GTTAAACACT
AACAGTGGTA GCTATATGGC TGATAGCGAT CTTATTGAGT GGACTGCAGC TAAGCCATTC
GCTCCACTCC CTTGGTCTAC GCCATTAACT GAAGTTGGCA ATGATTCTGT CAAATCAAGC
GCTCAAATAG TCTCGCTTCA AGCCCGCTCC CATCACCTCA CTTGGGAGCG GGTTTTACTC
GATATCCACA GTGGCCGCTT CTTCGGTGCT CTAGGTCCCT GGTTTATGGA TCTCGTCGCA
CTGGCCTTGA TCATCATGTC CATCTCTGGA GTCTATTTAT GGATACAGCA CAAACCAAAG
CGGGTTAAAT CAAGGTAA
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| Protein sequence | MTRKHHLSGR NSTSLMLKRQ VRPWHRWLGI FSAVFVLLIA ISGVLINHSN QLSIDSAHVK
QAWLLDYYGI KTPSNIHIYQ TSPLLANSDN LVWVDKHLAL EADSAIRGIV PFDDMLIAID
NSNLYLISNE GVLLEKQDIT TGLPSGLTAI ANDGQIWLNT NSGSYMADSD LIEWTAAKPF
APLPWSTPLT EVGNDSVKSS AQIVSLQARS HHLTWERVLL DIHSGRFFGA LGPWFMDLVA
LALIIMSISG VYLWIQHKPK RVKSR
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