Gene Nham_3633 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3633 
Symbol 
ID4031357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand+ 
Start bp3999464 
End bp4000105 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content63% 
IMG OID637972045 
ProductPepSY-associated TM helix 
Protein accessionYP_578821 
Protein GI92119092 
COG category[S] Function unknown 
COG ID[COG3295] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCGACG GCGATGAACT CTGGCAGCGA AAGAAGCGTC GCGCTTTCGT TATCAACCAG 
CTTTATCAAT GGCACTGGAT CACCTCCGGG CTCTGCCTGA TCGGCATGTT GTTGTTCGCC 
GTCACCGGAA TCACGCTGAA CAATTCCGGG AAAATCGAAG CCAAGCCGAC GGTCGTGATG 
CGCGAGGGGC AATTGCCACA GGCGCTGATC GCCGACCTCA AGCCTGAGCC CGGCGCAGCC 
AAGGCGGCTT TGTCGCCGGG CATCACCGGG TGGCTGCAAC GCGAGATCGG CGCCGATACC 
GCCGACCGCG ACACCGAATG GTCGGATCAG GAGGTCTATG TGGCCCTGCC CCGGCCCGGC 
GGCGACGCAT GGCTCAGCAT CCAGCGCGAC AGCGGCGCGG TGTCCTATGA AGTCACGGAC 
CGCGGCTGGA TCGCCTATCT CAACGATCTC CATAAGGGCC GTCATGCCGG CAAGGCGTGG 
AGCTGGTTCC TCGACGTGTT CGCGGCCGCT GCGATCATCT TCTGTGTCAC CGGCCTGCTG 
CTTCTGCAGC TTCATTCCAA GCGGCGCCCG GCCACATGGC CCGTCGTCGG CATGGGGCTG 
GTTATCCCGA TGCTGCTCGC TGTTCTCCTC ATTCATAGCT AG
 
Protein sequence
MVDGDELWQR KKRRAFVINQ LYQWHWITSG LCLIGMLLFA VTGITLNNSG KIEAKPTVVM 
REGQLPQALI ADLKPEPGAA KAALSPGITG WLQREIGADT ADRDTEWSDQ EVYVALPRPG 
GDAWLSIQRD SGAVSYEVTD RGWIAYLNDL HKGRHAGKAW SWFLDVFAAA AIIFCVTGLL 
LLQLHSKRRP ATWPVVGMGL VIPMLLAVLL IHS