87 homologs were found in PanDaTox collection
for query gene Swit_4189 on replicon NC_009511
Organism: Sphingomonas wittichii RW1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009511  Swit_4189  aromatic-ring-hydroxylating dioxygenase, beta subunit  100 
 
 		 160 aa  321  3e-87  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  0.0692425 
 
 
-
 
NC_010552  BamMC406_3524  aromatic-ring-hydroxylating dioxygenase beta subunit  47.97 
 
 		 167 aa  141  4e-33  Burkholderia ambifaria MC40-6  Bacteria  normal  1  normal  0.0527056 
 
 
-
 
NC_008543  Bcen2424_3618  aromatic-ring-hydroxylating dioxygenase, beta subunit  47.3 
 
 		 166 aa  140  9e-33  Burkholderia cenocepacia HI2424  Bacteria  normal  0.291454  normal  1 
 
 
-
 
NC_008391  Bamb_5354  aromatic-ring-hydroxylating dioxygenase, beta subunit  46.62 
 
 		 167 aa  139  9.999999999999999e-33  Burkholderia ambifaria AMMD  Bacteria  normal  0.0204089  normal  0.785478 
 
 
-
 
NC_010681  Bphyt_2157  aromatic-ring-hydroxylating dioxygenase beta subunit  45.83 
 
 		 166 aa  138  3e-32  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007511  Bcep18194_B2497  aromatic-ring-hydroxylating dioxygenase, beta subunit  46.98 
 
 		 166 aa  137  3.9999999999999997e-32  Burkholderia sp. 383  Bacteria  normal  0.0182458  normal  1 
 
 
-
 
NC_007951  Bxe_A2104  putative aromatic-ring-hydroxylating dioxygenase, beta subunit  46.53 
 
 		 166 aa  137  4.999999999999999e-32  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010086  Bmul_5080  aromatic-ring-hydroxylating dioxygenase beta subunit  45.95 
 
 		 167 aa  137  4.999999999999999e-32  Burkholderia multivorans ATCC 17616  Bacteria  normal  1  normal  0.218107 
 
 
-
 
NC_010515  Bcenmc03_3902  aromatic-ring-hydroxylating dioxygenase beta subunit  45.95 
 
 		 166 aa  137  7e-32  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  0.926313 
 
 
-
 
NC_007650  BTH_II0326  ring hydroxylating beta subunit  45.27 
 
 		 166 aa  134  6.0000000000000005e-31  Burkholderia thailandensis E264  Bacteria  normal  1  n/a   
 
 
-
 
NC_010322  PputGB1_2210  aromatic-ring-hydroxylating dioxygenase beta subunit  38.75 
 
 		 159 aa  123  1e-27  Pseudomonas putida GB-1  Bacteria  normal  1  normal  0.72478 
 
 
-
 
NC_007778  RPB_3896  aromatic-ring-hydroxylating dioxygenase, beta subunit  41.22 
 
 		 169 aa  120  9.999999999999999e-27  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009427  Saro_3813  aromatic-ring-hydroxylating dioxygenase, beta subunit  41.29 
 
 		 165 aa  119  9.999999999999999e-27  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.257439  n/a   
 
 
-
 
NC_009511  Swit_0743  aromatic-ring-hydroxylating dioxygenase, beta subunit  38.71 
 
 		 171 aa  115  1.9999999999999998e-25  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  0.158258 
 
 
-
 
NC_009654  Mmwyl1_1827  aromatic-ring-hydroxylating dioxygenase beta subunit  38.67 
 
 		 160 aa  106  1e-22  Marinomonas sp. MWYL1  Bacteria  normal  0.475727  normal  0.661206 
 
 
-
 
NC_008699  Noca_0827  aromatic-ring-hydroxylating dioxygenase, beta subunit  31.85 
 
 		 196 aa  73.6  0.000000000001  Nocardioides sp. JS614  Bacteria  normal  0.0728938  n/a   
 
 
-
 
NC_012792  Vapar_5383  aromatic-ring-hydroxylating dioxygenase beta subunit  29.93 
 
 		 162 aa  69.7  0.00000000002  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_012791  Vapar_0637  aromatic-ring-hydroxylating dioxygenase beta subunit  31.85 
 
 		 178 aa  68.6  0.00000000003  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_008786  Veis_1994  aromatic-ring-hydroxylating dioxygenase, beta subunit  30.26 
 
 		 180 aa  66.2  0.0000000002  Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  0.605287 
 
 
-
 
NC_007509  Bcep18194_C7072  aromatic-ring-hydroxylating dioxygenase, beta subunit  33.33 
 
 		 177 aa  65.5  0.0000000003  Burkholderia sp. 383  Bacteria  decreased coverage  0.00762065  normal  0.538573 
 
 
-
 
NC_009511  Swit_4175  aromatic-ring-hydroxylating dioxygenase, beta subunit  28.28 
 
 		 160 aa  64.7  0.0000000005  Sphingomonas wittichii RW1  Bacteria  hitchhiker  0.00253481  normal  0.0237067 
 
 
-
 
NC_009511  Swit_1532  aromatic-ring-hydroxylating dioxygenase, beta subunit  29.86 
 
 		 162 aa  60.8  0.000000007  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  0.014275 
 
 
-
 
NC_009511  Swit_1875  aromatic-ring-hydroxylating dioxygenase, beta subunit  28.78 
 
 		 162 aa  60.1  0.00000001  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012791  Vapar_1494  aromatic-ring-hydroxylating dioxygenase beta subunit  30.2 
 
 		 162 aa  58.9  0.00000003  Variovorax paradoxus S110  Bacteria  normal  0.708283  n/a   
 
 
-
 
NC_007951  Bxe_A3555  p-cumate dioxygenase small subunit (CmtAc)  30.97 
 
 		 180 aa  58.2  0.00000004  Burkholderia xenovorans LB400  Bacteria  normal  0.0559586  normal  0.808229 
 
 
-
 
NC_007802  Jann_1344  aromatic-ring-hydroxylating dioxygenase, beta subunit  29.87 
 
 		 159 aa  56.6  0.0000001  Jannaschia sp. CCS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008786  Veis_2678  aromatic-ring-hydroxylating dioxygenase, beta subunit  28.19 
 
 		 165 aa  55.8  0.0000002  Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008463  PA14_37550  putative ring-hydroxylating dioxygenase small subunit  30.71 
 
 		 169 aa  55.1  0.0000004  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0448308  normal  1 
 
 
-
 
NC_009485  BBta_3236  putative dioxygenase beta subunit  23.87 
 
 		 158 aa  52  0.000003  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.665811  normal  0.392142 
 
 
-
 
NC_012791  Vapar_1503  aromatic-ring-hydroxylating dioxygenase beta subunit  26.92 
 
 		 155 aa  51.6  0.000004  Variovorax paradoxus S110  Bacteria  normal  0.223026  n/a   
 
 
-
 
NC_008705  Mkms_1660  aromatic-ring-hydroxylating dioxygenase, beta subunit  30.25 
 
 		 169 aa  51.6  0.000004  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008705  Mkms_1667  aromatic-ring-hydroxylating dioxygenase, beta subunit  30.25 
 
 		 169 aa  51.6  0.000004  Mycobacterium sp. KMS  Bacteria  normal  0.595327  normal  1 
 
 
-
 
NC_008146  Mmcs_1634  aromatic-ring-hydroxylating dioxygenase, beta subunit  30.25 
 
 		 236 aa  51.6  0.000004  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008146  Mmcs_1641  aromatic-ring-hydroxylating dioxygenase, beta subunit  30.25 
 
 		 169 aa  51.6  0.000004  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008703  Mkms_5621  aromatic-ring-hydroxylating dioxygenase, beta subunit  30.25 
 
 		 169 aa  51.6  0.000004  Mycobacterium sp. KMS  Bacteria  normal  0.0675281  normal  1 
 
 
-
 
NC_009077  Mjls_4072  aromatic-ring-hydroxylating dioxygenase, beta subunit  29.11 
 
 		 171 aa  51.6  0.000004  Mycobacterium sp. JLS  Bacteria  normal  0.161007  normal  0.827425 
 
 
-
 
NC_008726  Mvan_0483  aromatic-ring-hydroxylating dioxygenase, beta subunit  30.25 
 
 		 169 aa  51.2  0.000005  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.122818  normal  1 
 
 
-
 
NC_009338  Mflv_0670  aromatic-ring-hydroxylating dioxygenase, beta subunit  30.25 
 
 		 181 aa  51.6  0.000005  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009338  Mflv_0572  aromatic-ring-hydroxylating dioxygenase, beta subunit  30.25 
 
 		 181 aa  51.6  0.000005  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.455615  normal  1 
 
 
-
 
NC_009077  Mjls_2244  aromatic-ring-hydroxylating dioxygenase, beta subunit  30.25 
 
 		 169 aa  51.2  0.000005  Mycobacterium sp. JLS  Bacteria  normal  0.0227902  normal  1 
 
 
-
 
NC_009077  Mjls_1607  aromatic-ring-hydroxylating dioxygenase, beta subunit  30.25 
 
 		 169 aa  51.2  0.000005  Mycobacterium sp. JLS  Bacteria  normal  0.279924  normal  1 
 
 
-
 
NC_009512  Pput_2897  aromatic-ring-hydroxylating dioxygenase, beta subunit  29.03 
 
 		 180 aa  50.8  0.000008  Pseudomonas putida F1  Bacteria  normal  0.367264  normal  0.364758 
 
 
-
 
NC_008704  Mkms_5854  aromatic-ring-hydroxylating dioxygenase, beta subunit  24.68 
 
 		 180 aa  50.8  0.000009  Mycobacterium sp. KMS  Bacteria  hitchhiker  0.00251322  normal  1 
 
 
-
 
NC_008147  Mmcs_5457  aromatic-ring-hydroxylating dioxygenase, beta subunit  24.68 
 
 		 180 aa  50.8  0.000009  Mycobacterium sp. MCS  Bacteria  normal  0.164011  normal  1 
 
 
-
 
NC_008726  Mvan_0526  aromatic-ring-hydroxylating dioxygenase, beta subunit  24.68 
 
 		 180 aa  50.1  0.00001  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.635565  normal  1 
 
 
-
 
NC_008705  Mkms_1691  aromatic-ring-hydroxylating dioxygenase, beta subunit  24.68 
 
 		 180 aa  50.1  0.00001  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009077  Mjls_1640  aromatic-ring-hydroxylating dioxygenase, beta subunit  24.68 
 
 		 180 aa  50.1  0.00001  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008146  Mmcs_1667  aromatic-ring-hydroxylating dioxygenase, beta subunit  24.68 
 
 		 180 aa  50.1  0.00001  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_009338  Mflv_0639  aromatic-ring-hydroxylating dioxygenase, beta subunit  24.68 
 
 		 180 aa  50.1  0.00001  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.520226  normal  1 
 
 
-
 
NC_008703  Mkms_5640  aromatic-ring-hydroxylating dioxygenase, beta subunit  25.32 
 
 		 180 aa  50.1  0.00001  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009338  Mflv_0568  aromatic-ring-hydroxylating dioxygenase, beta subunit  29.63 
 
 		 169 aa  50.1  0.00001  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.924793  normal  1 
 
 
-
 
NC_009338  Mflv_0557  aromatic-ring-hydroxylating dioxygenase, beta subunit  24.68 
 
 		 180 aa  50.1  0.00001  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.610987  normal  1 
 
 
-
 
NC_008726  Mvan_0487  aromatic-ring-hydroxylating dioxygenase, beta subunit  29.63 
 
 		 169 aa  49.3  0.00002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009338  Mflv_0663  aromatic-ring-hydroxylating dioxygenase, beta subunit  29.63 
 
 		 169 aa  49.3  0.00002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009511  Swit_1757  aromatic-ring-hydroxylating dioxygenase, beta subunit  33.76 
 
 		 175 aa  49.7  0.00002  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009511  Swit_2635  2-chlorobenzoate 1,2-dioxygenase  30.99 
 
 		 171 aa  49.7  0.00002  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008703  Mkms_5625  aromatic-ring-hydroxylating dioxygenase, beta subunit  29.01 
 
 		 169 aa  47.4  0.00007  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009338  Mflv_0594  3-phenylpropionate dioxygenase subunit beta  33.33 
 
 		 199 aa  47.8  0.00007  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.767333  normal  1 
 
 
-
 
NC_009077  Mjls_2238  aromatic-ring-hydroxylating dioxygenase, beta subunit  29.01 
 
 		 169 aa  47.4  0.00007  Mycobacterium sp. JLS  Bacteria  normal  0.566158  normal  1 
 
 
-
 
NC_008726  Mvan_0464  3-phenylpropionate dioxygenase subunit beta  33.64 
 
 		 198 aa  46.6  0.0001  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.233326  normal  1 
 
 
-
 
NC_009077  Mjls_1596  3-phenylpropionate dioxygenase subunit beta  33.33 
 
 		 199 aa  47  0.0001  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009338  Mflv_0684  3-phenylpropionate dioxygenase subunit beta  32.71 
 
 		 198 aa  46.2  0.0002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008705  Mkms_1648  3-phenylpropionate dioxygenase subunit beta  32.71 
 
 		 198 aa  45.1  0.0004  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008146  Mmcs_1623  3-phenylpropionate dioxygenase subunit beta  32.71 
 
 		 198 aa  45.1  0.0004  Mycobacterium sp. MCS  Bacteria  normal  0.0450765  n/a   
 
 
-
 
NC_008786  Veis_2669  aromatic-ring-hydroxylating dioxygenase, beta subunit  26.75 
 
 		 154 aa  45.1  0.0004  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.819531  normal  1 
 
 
-
 
NC_008726  Mvan_4416  benzene 1,2-dioxygenase  32.41 
 
 		 187 aa  44.3  0.0007  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.258454  normal  1 
 
 
-
 
NC_009511  Swit_0889  aromatic-ring-hydroxylating dioxygenase, beta subunit  25.97 
 
 		 176 aa  43.9  0.001  Sphingomonas wittichii RW1  Bacteria  normal  0.93204  normal  0.763516 
 
 
-
 
NC_008704  Mkms_5846  3-phenylpropionate dioxygenase subunit beta  27.91 
 
 		 185 aa  43.9  0.001  Mycobacterium sp. KMS  Bacteria  normal  0.585769  normal  1 
 
 
-
 
NC_008147  Mmcs_5449  3-phenylpropionate dioxygenase subunit beta  27.91 
 
 		 185 aa  43.9  0.001  Mycobacterium sp. MCS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008146  Mmcs_1681  aromatic-ring-hydroxylating dioxygenase, beta subunit  29.91 
 
 		 170 aa  42.4  0.003  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_009338  Mflv_0625  aromatic-ring-hydroxylating dioxygenase, beta subunit  29.91 
 
 		 170 aa  42.4  0.003  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008726  Mvan_0540  aromatic-ring-hydroxylating dioxygenase, beta subunit  29.91 
 
 		 170 aa  42.4  0.003  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.151526  normal  1 
 
 
-
 
NC_009338  Mflv_0543  aromatic-ring-hydroxylating dioxygenase, beta subunit  29.91 
 
 		 170 aa  42.4  0.003  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008538  Arth_4347  3-phenylpropionate dioxygenase subunit beta  28.57 
 
 		 179 aa  42.4  0.003  Arthrobacter sp. FB24  Bacteria  normal  0.285942  n/a   
 
 
-
 
NC_009077  Mjls_1654  aromatic-ring-hydroxylating dioxygenase, beta subunit  29.91 
 
 		 170 aa  42.4  0.003  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008705  Mkms_1710  aromatic-ring-hydroxylating dioxygenase, beta subunit  29.91 
 
 		 170 aa  42.4  0.003  Mycobacterium sp. KMS  Bacteria  normal  0.610525  normal  0.664469 
 
 
-
 
NC_008703  Mkms_5611  aromatic-ring-hydroxylating dioxygenase, beta subunit  29.91 
 
 		 170 aa  42.4  0.003  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008147  Mmcs_5442  aromatic-ring-hydroxylating dioxygenase, beta subunit  29.91 
 
 		 170 aa  42  0.004  Mycobacterium sp. MCS  Bacteria  normal  0.843649  normal  1 
 
 
-
 
NC_008704  Mkms_5839  aromatic-ring-hydroxylating dioxygenase, beta subunit  29.91 
 
 		 170 aa  42  0.004  Mycobacterium sp. KMS  Bacteria  normal  0.341302  normal  1 
 
 
-
 
NC_009338  Mflv_0536  aromatic-ring-hydroxylating dioxygenase, beta subunit  32.41 
 
 		 172 aa  41.2  0.005  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008146  Mmcs_1690  aromatic-ring-hydroxylating dioxygenase, beta subunit  31.48 
 
 		 172 aa  40.8  0.008  Mycobacterium sp. MCS  Bacteria  normal  0.0766019  n/a   
 
 
-
 
NC_008705  Mkms_1717  aromatic-ring-hydroxylating dioxygenase, beta subunit  31.48 
 
 		 172 aa  40.8  0.008  Mycobacterium sp. KMS  Bacteria  normal  0.838808  normal  1 
 
 
-
 
NC_009485  BBta_3193  putative aromatic-ring-hydroxylating dioxygenase, beta subunit  25 
 
 		 217 aa  40.8  0.008  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008726  Mvan_0547  aromatic-ring-hydroxylating dioxygenase, beta subunit  31.48 
 
 		 172 aa  40.8  0.008  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  0.948584 
 
 
-
 
NC_009077  Mjls_1661  aromatic-ring-hydroxylating dioxygenase, beta subunit  31.48 
 
 		 172 aa  40.8  0.008  Mycobacterium sp. JLS  Bacteria  normal  0.0144814  normal  1 
 
 
-
 
NC_007794  Saro_0539  2-chlorobenzoate 1,2-dioxygenase  26.35 
 
 		 161 aa  40.4  0.009  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  1  n/a   
 
 
-
 
NC_008703  Mkms_5648  3-phenylpropionate dioxygenase subunit beta  27.13 
 
 		 184 aa  40.4  0.009  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>