53 homologs were found in PanDaTox collection
for query gene Bphyt_2157 on replicon NC_010681
Organism: Burkholderia phytofirmans PsJN



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010681  Bphyt_2157  aromatic-ring-hydroxylating dioxygenase beta subunit  100 
 
 
166 aa  337  4e-92  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A2104  putative aromatic-ring-hydroxylating dioxygenase, beta subunit  91.57 
 
 
166 aa  314  3e-85  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B2497  aromatic-ring-hydroxylating dioxygenase, beta subunit  77.11 
 
 
166 aa  262  1e-69  Burkholderia sp. 383  Bacteria  normal  0.0182458  normal 
 
 
-
 
NC_010086  Bmul_5080  aromatic-ring-hydroxylating dioxygenase beta subunit  76.65 
 
 
167 aa  262  1e-69  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.218107 
 
 
-
 
NC_010515  Bcenmc03_3902  aromatic-ring-hydroxylating dioxygenase beta subunit  76.51 
 
 
166 aa  260  6e-69  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.926313 
 
 
-
 
NC_008543  Bcen2424_3618  aromatic-ring-hydroxylating dioxygenase, beta subunit  76.51 
 
 
166 aa  259  1e-68  Burkholderia cenocepacia HI2424  Bacteria  normal  0.291454  normal 
 
 
-
 
NC_008391  Bamb_5354  aromatic-ring-hydroxylating dioxygenase, beta subunit  76.05 
 
 
167 aa  258  3e-68  Burkholderia ambifaria AMMD  Bacteria  normal  0.0204089  normal  0.785478 
 
 
-
 
NC_010552  BamMC406_3524  aromatic-ring-hydroxylating dioxygenase beta subunit  74.85 
 
 
167 aa  258  3e-68  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.0527056 
 
 
-
 
NC_007650  BTH_II0326  ring hydroxylating beta subunit  68.07 
 
 
166 aa  238  2e-62  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009427  Saro_3813  aromatic-ring-hydroxylating dioxygenase, beta subunit  44.81 
 
 
165 aa  148  4e-35  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.257439  n/a   
 
 
-
 
NC_007778  RPB_3896  aromatic-ring-hydroxylating dioxygenase, beta subunit  45.45 
 
 
169 aa  142  2e-33  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_4189  aromatic-ring-hydroxylating dioxygenase, beta subunit  45.83 
 
 
160 aa  138  3.9999999999999997e-32  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.0692425 
 
 
-
 
NC_010322  PputGB1_2210  aromatic-ring-hydroxylating dioxygenase beta subunit  39.62 
 
 
159 aa  129  1.0000000000000001e-29  Pseudomonas putida GB-1  Bacteria  normal  normal  0.72478 
 
 
-
 
NC_009511  Swit_0743  aromatic-ring-hydroxylating dioxygenase, beta subunit  36.81 
 
 
171 aa  121  4e-27  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.158258 
 
 
-
 
NC_009654  Mmwyl1_1827  aromatic-ring-hydroxylating dioxygenase beta subunit  40 
 
 
160 aa  120  9.999999999999999e-27  Marinomonas sp. MWYL1  Bacteria  normal  0.475727  normal  0.661206 
 
 
-
 
NC_007509  Bcep18194_C7072  aromatic-ring-hydroxylating dioxygenase, beta subunit  28.67 
 
 
177 aa  68.9  0.00000000003  Burkholderia sp. 383  Bacteria  decreased coverage  0.00762065  normal  0.538573 
 
 
-
 
NC_007802  Jann_1344  aromatic-ring-hydroxylating dioxygenase, beta subunit  28.48 
 
 
159 aa  66.6  0.0000000001  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_0637  aromatic-ring-hydroxylating dioxygenase beta subunit  28.1 
 
 
178 aa  62.8  0.000000002  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_4072  aromatic-ring-hydroxylating dioxygenase, beta subunit  28.29 
 
 
171 aa  60.5  0.00000001  Mycobacterium sp. JLS  Bacteria  normal  0.161007  normal  0.827425 
 
 
-
 
NC_009511  Swit_1875  aromatic-ring-hydroxylating dioxygenase, beta subunit  29.79 
 
 
162 aa  58.9  0.00000003  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_008703  Mkms_5625  aromatic-ring-hydroxylating dioxygenase, beta subunit  30.25 
 
 
169 aa  58.5  0.00000004  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0663  aromatic-ring-hydroxylating dioxygenase, beta subunit  30.52 
 
 
169 aa  58.5  0.00000004  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0487  aromatic-ring-hydroxylating dioxygenase, beta subunit  30.52 
 
 
169 aa  58.5  0.00000004  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0568  aromatic-ring-hydroxylating dioxygenase, beta subunit  29.63 
 
 
169 aa  57.8  0.00000006  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.924793  normal 
 
 
-
 
NC_009077  Mjls_2238  aromatic-ring-hydroxylating dioxygenase, beta subunit  30.52 
 
 
169 aa  57.4  0.00000008  Mycobacterium sp. JLS  Bacteria  normal  0.566158  normal 
 
 
-
 
NC_012792  Vapar_5383  aromatic-ring-hydroxylating dioxygenase beta subunit  25.5 
 
 
162 aa  57.4  0.00000009  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_1634  aromatic-ring-hydroxylating dioxygenase, beta subunit  31.65 
 
 
236 aa  56.6  0.0000001  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_1641  aromatic-ring-hydroxylating dioxygenase, beta subunit  30.57 
 
 
169 aa  56.6  0.0000001  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1667  aromatic-ring-hydroxylating dioxygenase, beta subunit  30.57 
 
 
169 aa  56.6  0.0000001  Mycobacterium sp. KMS  Bacteria  normal  0.595327  normal 
 
 
-
 
NC_008705  Mkms_1660  aromatic-ring-hydroxylating dioxygenase, beta subunit  30.57 
 
 
169 aa  56.6  0.0000001  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008703  Mkms_5621  aromatic-ring-hydroxylating dioxygenase, beta subunit  30.57 
 
 
169 aa  56.6  0.0000001  Mycobacterium sp. KMS  Bacteria  normal  0.0675281  normal 
 
 
-
 
NC_009338  Mflv_0572  aromatic-ring-hydroxylating dioxygenase, beta subunit  30.07 
 
 
181 aa  55.8  0.0000002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.455615  normal 
 
 
-
 
NC_009338  Mflv_0670  aromatic-ring-hydroxylating dioxygenase, beta subunit  30.07 
 
 
181 aa  55.8  0.0000002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_0827  aromatic-ring-hydroxylating dioxygenase, beta subunit  26.76 
 
 
196 aa  56.2  0.0000002  Nocardioides sp. JS614  Bacteria  normal  0.0728938  n/a   
 
 
-
 
NC_009511  Swit_1532  aromatic-ring-hydroxylating dioxygenase, beta subunit  27.4 
 
 
162 aa  56.6  0.0000002  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.014275 
 
 
-
 
NC_009077  Mjls_2244  aromatic-ring-hydroxylating dioxygenase, beta subunit  30.57 
 
 
169 aa  55.8  0.0000003  Mycobacterium sp. JLS  Bacteria  normal  0.0227902  normal 
 
 
-
 
NC_008726  Mvan_0483  aromatic-ring-hydroxylating dioxygenase, beta subunit  30.57 
 
 
169 aa  55.8  0.0000003  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.122818  normal 
 
 
-
 
NC_009077  Mjls_1607  aromatic-ring-hydroxylating dioxygenase, beta subunit  30.57 
 
 
169 aa  55.8  0.0000003  Mycobacterium sp. JLS  Bacteria  normal  0.279924  normal 
 
 
-
 
NC_009511  Swit_4175  aromatic-ring-hydroxylating dioxygenase, beta subunit  24.48 
 
 
160 aa  54.3  0.0000007  Sphingomonas wittichii RW1  Bacteria  hitchhiker  0.00253481  normal  0.0237067 
 
 
-
 
NC_007951  Bxe_A3555  p-cumate dioxygenase small subunit (CmtAc)  30.61 
 
 
180 aa  54.3  0.0000008  Burkholderia xenovorans LB400  Bacteria  normal  0.0559586  normal  0.808229 
 
 
-
 
NC_012791  Vapar_1494  aromatic-ring-hydroxylating dioxygenase beta subunit  24.5 
 
 
162 aa  53.5  0.000001  Variovorax paradoxus S110  Bacteria  normal  0.708283  n/a   
 
 
-
 
NC_007794  Saro_1681  aromatic-ring-hydroxylating dioxygenase, beta subunit  30.67 
 
 
166 aa  53.1  0.000002  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_2678  aromatic-ring-hydroxylating dioxygenase, beta subunit  25.81 
 
 
165 aa  53.1  0.000002  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_1994  aromatic-ring-hydroxylating dioxygenase, beta subunit  25.74 
 
 
180 aa  52  0.000004  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.605287 
 
 
-
 
NC_009512  Pput_2897  aromatic-ring-hydroxylating dioxygenase, beta subunit  29.14 
 
 
180 aa  48.9  0.00003  Pseudomonas putida F1  Bacteria  normal  0.367264  normal  0.364758 
 
 
-
 
NC_007969  Pcryo_1266  2-chlorobenzoate 1,2-dioxygenase  25.35 
 
 
165 aa  47  0.0001  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_008686  Pden_1178  2-chlorobenzoate 1,2-dioxygenase  30.48 
 
 
162 aa  43.9  0.001  Paracoccus denitrificans PD1222  Bacteria  normal  0.154958  normal 
 
 
-
 
NC_008781  Pnap_2111  2-chlorobenzoate 1,2-dioxygenase  26.09 
 
 
162 aa  43.9  0.001  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0182348  normal  0.450254 
 
 
-
 
NC_009485  BBta_3236  putative dioxygenase beta subunit  24.64 
 
 
158 aa  43.1  0.002  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.665811  normal  0.392142 
 
 
-
 
NC_009485  BBta_3193  putative aromatic-ring-hydroxylating dioxygenase, beta subunit  25.81 
 
 
217 aa  42.7  0.002  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_4883  benzoate 1,2-dioxygenase subunit beta  24.64 
 
 
164 aa  42.4  0.003  Cupriavidus metallidurans CH34  Bacteria  normal  0.0428911  normal  0.181589 
 
 
-
 
NC_012791  Vapar_1503  aromatic-ring-hydroxylating dioxygenase beta subunit  22.82 
 
 
155 aa  42.4  0.003  Variovorax paradoxus S110  Bacteria  normal  0.223026  n/a   
 
 
-
 
NC_010623  Bphy_5351  benzoate 1,2-dioxygenase, small subunit  25 
 
 
167 aa  40.8  0.008  Burkholderia phymatum STM815  Bacteria  normal  normal  0.449745 
 
 
-
 
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